Brassica rapa (field mustard): 103842525
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Entry
103842525 CDS
T03449
Name
(RefSeq) RNA-binding protein 28 isoform X2
KO
K14573
nucleolar protein 4
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103842525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103842525
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
103842525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
103842525
NCBI-ProteinID:
XP_009117403
UniProt:
M4EQW7
LinkDB
All DBs
Position
A09:40003712..40009194
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AA seq
972 aa
AA seq
DB search
MGKNTKKERKDGEEKSQHSAATVCVSGLPYSFTNAQLEEAFSDVGPVRLCFMVTNKGSNE
HRGFAFVKFALPEDANRAIELKNGSTVGGRRITVKQATHRPSLKERRTKAAQGVSLPDSS
QAESDDNKDSLVPETVTETETDKQVPPPEKKIEKPLERKKPTKPAKLLVDLADKETCSDK
QRVARTVIFGGLVNAEMAEAVHSRVKKIGTVCSVRYPLPKEELQQNGLTQDGCRAEASAV
LFTSVKSACAAVATLHQTEIKGNLIWARQLGGEGSKAQKWKLIIRNLPFKAKPSEIKEVF
SAVGFVWDVFVPKNIETGLPKGFAFVKFTCKRDAENAIQKFNGHMFSKRPIAVDWAVPKN
LYNGAADAATAPEDGEKDGSDGDSDNSSVDLEEVDDAVESHQSSGDDTDNDEEDGSNKPS
ESDALVKDAETDVNFEEEADVARKVLKNLLGSSKVTIASQGGETEESDINILEDSSTKPV
VESSGVSEPLKSSKTKEAAPKETQENDDFKRTVFISNIPFDVSKEEVTQRFTAFGQVESL
FLVLHPVTKRPKGTAFLKFKTADASDAAISAASSASGVGVLLKGRQLSVMRAVDKKSAKD
IGLEKTKEKNIDHRNLYLAKEGQILEGTPAAEGVSAEDMDRRRRLHENKMKKLQSPNFHV
SKTRIVIYNLPKSMDEKQLQKLLVDAVTSRATKQKPTIRQIKFLQNEKKGKVDTKNYSRG
VAFVEFTEPDHALVALRVLNNNPETFGPQHRPVIEFAVDNVQKLKVHKANQQQQRNRYNE
SREQRENGEAQGEDNHPGNDLKRRTRDGDNTGSVEENANGYKKRKPMRPREQRREESKPE
EKSSLSVKEDARNKRPTRAQENTKEPASNQKGQWKKRQQDASEKPDEKKISKDVSDAPRK
RKFEEVRGGDNVNGQRKRKNQNERKKKQGGPPEVVDKLDMLIEQYRSKFTQSSTKTGPQK
QSSGQVRRWFQS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaacacgaagaaagagaggaaagatggagaagaaaaatctcaacactctgct
gccactgtgtgcgtctctggcttgccttattccttcaccaacgctcagctcgaagaagcc
tttagcgacgttggtcccgtcaggctttgcttcatggtcacaaacaaaggatcaaacgaa
catcgtggctttgcttttgttaaatttgctttgccagaagatgctaaccgtgccattgag
ctgaagaacggttctactgttggcggccgtaggattacagttaaacaagccacgcacagg
ccttctcttaaagagcgtcgtactaaagcagcccaaggagtctcattacctgatagttcc
caggcagagagtgacgataacaaggacagtttggtccctgagactgtgactgagactgag
acagacaagcaagttcctccaccggagaagaaaatagagaagccacttgagcgcaaaaaa
cctacaaagccagcaaagcttcttgttgatttagctgataaagagacatgttcagacaag
caaagagttgcaagaactgtaatctttggtggccttgttaatgctgagatggcagaggca
gtgcatagccgtgtcaaaaagattggcactgtgtgctccgtcagatatcccctccccaaa
gaggagcttcaacaaaatggtcttacccaggacggatgcagggcagaagcatcagctgtt
ctctttacgagtgtcaaatctgcttgtgctgctgttgcaacactacatcagacagagata
aagggaaatctcatttgggcgcgtcagctcggtggggagggatcaaaggctcagaagtgg
aagcttattatccgaaatcttcctttcaaggctaaacctagtgaaattaaagaggtcttt
tcagcagtagggtttgtctgggatgtttttgttcctaaaaatattgaaactgggctacct
aaggggtttgcatttgtcaaattcacgtgtaagagagatgcagaaaatgcaatacaaaag
ttcaacgggcacatgttcagtaaaagacctatagctgtagactgggctgtacctaagaat
ctctataatggtgccgctgatgccgccactgctccagaagatggtgaaaaagatggaagt
gatggggacagtgataatagtagtgttgatttggaggaggttgatgatgctgttgagagc
caccaatcttcaggagatgatactgacaatgatgaggaggacggcagtaacaaaccgagt
gaatcagatgcactggtgaaagatgctgagaccgatgtgaattttgaagaggaggccgat
gttgcgagaaaggtgcttaagaacttgcttgggtcttcaaaagtaacaattgcatctcag
ggtggagagacagaggaatcagatataaacatactcgaggattcatcaactaagcctgtc
gttgaatcttctggtgtctctgaacctttgaaatccagtaaaaccaaagaggcggctccc
aaagaaacgcaggaaaatgatgatttcaagagaactgtatttataagcaacatcccgttt
gatgttagcaaggaggaagtcacacagaggtttaccgcatttgggcaagttgaatcttta
ttcctagttctccacccagtcacaaaacgaccaaaagggaccgcttttctcaagttcaaa
acagcagatgcatcagatgcagccatatcagctgccagtagtgcctcaggtgttggtgtc
cttcttaaaggaaggcaactgagcgttatgagggctgtggataagaagtccgcaaaggac
ataggactcgaaaagacaaaggagaagaacattgaccatcggaatctttatcttgctaag
gaaggtcagatccttgaaggtacacctgctgctgagggtgtgtctgcagaagatatggac
aggcgacgaagattgcatgaaaacaagatgaaaaagcttcagtctcctaacttccatgta
tctaaaacgaggattgtaatttataatttaccaaagtccatggatgaaaagcaactacag
aagctcttagtcgatgctgttacctcccgagctacaaagcagaagccaaccatccgacag
atcaagttcttacaaaacgagaagaagggtaaagttgacacgaagaactactcacgtgga
gttgcttttgttgagttcaccgagcctgaccatgctcttgtggccctgagagtacttaac
aacaatcctgagacgtttggccctcaacatcgtcccgttatagaatttgctgttgataac
gtccagaagctgaaggtacacaaagctaaccagcagcagcaacgcaatagatacaatgaa
tctagggagcagcgagagaacggcgaagcgcagggagaggacaatcatcctggcaatgat
ctaaaacgaagaacgagggatggagataacactggttcagtggaagagaatgcaaacggg
tataagaagaggaaacctatgcgcccacgtgaacagaggagagaagaatcaaaaccagag
gagaagagcagtctctctgtgaaagaagatgcaaggaacaagaggcctacacgtgcacaa
gaaaatacaaaagaaccggcttcaaaccagaaaggccagtggaagaagagacagcaagat
gcttctgagaaaccagatgagaagaagatatccaaagatgtgagcgatgcgccaagaaag
agaaagtttgaggaggttagaggcggagataatgtaaacgggcaaaggaagagaaagaat
cagaacgagaggaagaagaagcaaggtggaccccccgaggttgtggacaagctggatatg
ctgatcgagcagtacaggtctaagttcacccagagctcaaccaaaaccggtccacagaaa
cagagttccggtcaagtcaggagatggttccagtcctga
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