Brassica rapa (field mustard): 103842638
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Entry
103842638 CDS
T03449
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03082
ATP-dependent chromatin remodeling
brp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103842638
03083 Polycomb repressive complex
103842638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brp03036
]
103842638
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103842638
Histone modification proteins
HAT complexes
HATB complex
103842638
HDAC complexes
Sin3A-HDAC complex
103842638
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103842638
PRC2.2
103842638
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103842638
Heterochromatin formation proteins
Other heterochromatin formation proteins
103842638
Chromatin remodeling factors
NuRD complex
103842638
NuRF complex
103842638
NuRF complex (fruit fly)
103842638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_DCAF12
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
103842638
NCBI-ProteinID:
XP_009117535
UniProt:
M4EQL4
LinkDB
All DBs
Position
A09:complement(40473652..40476803)
Genome browser
AA seq
504 aa
AA seq
DB search
MESDEAEAAGAASPSGGTVTPAPKKRGRKPKSKEESQTQEERGGKMKESGKKTKQEEQSV
DEKYTQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNT
LVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIIATHT
DSPDVLIWDVETQPNRHAVLGAATSRPDLILTGHQDNAEYALAMCPTEPFVLSGGKDKSV
VLWSIQDHITTAASTDSKSSGSIIKQTGEGGDKTESPSLGPRGVYHGHDDTVEDVAFSPT
SAQEFCSVGDDSCLILWDARTGTSPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVR
LYDRRNLTSNGVGTPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKS
DRAAKNPAGLFFQHAGHRDKVVDFHWNAEDPWTIVSVSDDCETTGGGGTLQIWRMSDLIY
RPEEEVLAELEKFKSHVMTCASKP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgacgaagcggaagcggcaggagcagcgtcgccgagcggaggaaccgtgaca
ccggcgccgaagaagagagggcggaaacctaagagcaaggaagagtctcagacgcaggag
gagaggggtgggaaaatgaaggaaagcgggaagaaaacgaagcaggaggagcagagtgtg
gacgagaagtacactcagtggaaaggtctcgtccccattctctacgattggctcgccaat
cacaacctcgtctggccttccctctcttgcagatggggtccacagcttgaacaagcaacg
tacaagaatcgacagcgtctttacctctcagaacaaactgatggcagtgtgcccaacact
ctagtcatagcgaattgcgaagttgttaagccaagagtcgctgccgcagagcacatatct
cagttcaacgaagaagcacgttctccatttgtgaagaagttcaagaccatcattcaccct
ggagaggttaacagaatcagggaactcccacaaaacagtaagattattgctactcacacc
gacagtcctgatgttctcatttgggatgttgaaacccaaccaaaccgtcatgctgtcctt
ggagctgctacttcccgtcctgatttgatattaactggacatcaagacaatgctgaatac
gctcttgcaatgtgcccaaccgaaccctttgtcctctctggaggcaaggacaagtcggtt
gttttgtggagtatccaggaccacatcacaacggctgctagtacagattccaaatcatct
ggatccatcatcaaacagactggtgaaggtggtgataagactgagagtccttctcttggc
ccgcgaggtgtatatcatggccatgatgataccgttgaagatgtcgctttcagccccact
agtgcacaagagttctgcagtgtcggtgacgattcttgccttatactatgggatgcaaga
acaggcactagccctgtcaccaaggttgaaaaggcgcacgatgctgatcttcattgtgtc
gattggaaccctcatgatgacaatctcatcctgacagggtctgcagacaacactgttcgg
ttgtatgatcgtaggaatctgacctcaaatggagtgggtacgcctatttacaaatttgaa
ggccacaaagctgctgttctttgcgttcagtggtctcctgataagtcatctgtttttggg
agttccgcagaagatggtctcttgaacatctgggattatgacagggtcagtaagaagtct
gatcgtgcagctaaaaaccctgcggggctcttcttccagcatgctgggcacagggacaaa
gtagttgatttccactggaatgcggaggacccttggacaattgtcagtgtttctgatgac
tgtgagactactggtggaggtggaacactgcagatatggcggatgagtgacttgatttac
agaccggaagaggaagttctggcagaattggagaagttcaagtcgcatgttatgacatgt
gcctccaagccttga
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