Brassica rapa (field mustard): 103842713
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Entry
103842713 CDS
T03449
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1 isoform X2
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103842713
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
brp01007
]
103842713
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103842713
Enzymes [BR:
brp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
103842713
Amino acid related enzymes [BR:
brp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
103842713
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103842713
Prokaryotic type
103842713
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
103842713
NCBI-ProteinID:
XP_009117622
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All DBs
Position
A09:complement(40848822..40853145)
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AA seq
628 aa
AA seq
DB search
MADEHPRDEAYLSAVIEKRIRLFEEFQAKQLAEIQSRPHEPIKVTIRDGGNVKEGKRWET
TPAEIARQISVGLANSALISSVNDVLWDMNRPLEADCSLEFFSFDSDKGRDTFWRSSAHI
LALEYGCKLCVGPCKARDEGFFYDAFYGDLGLNEQHFPETEAGDAREGHPFERIEVTRGQ
ALEMFPDDNTFKAELLTEDKTTVYRCGPLVDLCSGPHIPNTSFVKAFKCLNLLSVLLGHH
HQLFFCHPLSPGSWFFEKHGTRVYNKLMHFIGNEYRKRGYEEVISPNIYNMKLWETSGHA
ANYKENMYTFDIDKQEFGLKPMNCPGHCLMFQHRLRSYKELPIRLADFGVLHRNEASEAL
SGLTHTRRFQQDDAHIFCTKDQVSGELKRALEFVDYVYTKFGFTYELKLSTRPEKYLGDL
TTWDRAERDLEEALEDFGKPFLVNRGAGEFYGPKIDITVSDAMKSYVQCATLQLDFQLPA
LFELEYTAMAEGSSDTPVMIHRAVLGSVERMFTTLVEHYKGKWPFWLSPRQAIVCSLSKD
SHEYAEKVREQIHEAGYYVDVDITDRNISKKVREAQVAQYNYILVVGAEETTTGHVTVRR
RNEDLSEFPVLSVENLLDEFKLKTANFL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaacatcccagggacgaggcttatctctcagccgtcatcgagaagcgtatc
aggctcttcgaggagttccaagcgaagcagctcgcggagattcagtctcggccacacgag
ccgatcaaggttacaattcgagatggtggaaacgtgaaagaagggaagagatgggagacg
actccagcagaaatcgcgaggcaaatttctgtgggattggcaaactcagcgctgatctct
tcggtaaacgatgtcctctgggacatgaataggccactggaagctgattgttcgcttgag
tttttcagttttgacagcgacaaaggccgtgatactttctggcgttctagcgctcacatt
ctcgccctggagtatggttgtaagctgtgcgttggaccctgcaaagctagagatgagggt
ttcttctacgatgcattctatggcgatctgggtttaaacgagcaacactttcccgaaact
gaagcaggggatgctcgagaaggacatccatttgaaaggattgaagtgaccaggggtcag
gctcttgagatgtttcctgatgataatacttttaaggctgaactcctcaccgaggacaaa
accaccgtctacaggtgtggtcctttggttgatctgtgtagtggaccacatataccaaat
acttcctttgtgaaagctttcaagtgtttgaatttgctttcggtgctattaggccaccat
caccaacttttcttttgtcacccactcagccctgggagttggttcttcgagaaacatggt
actcgcgtatataataagctgatgcatttcatcgggaatgaatatcggaaaaggggctac
gaagaggttatttcaccaaatatttacaacatgaaactctgggaaacatccggacatgct
gcaaactacaaggaaaatatgtacacgtttgatattgataaacaagagtttgggctcaaa
cctatgaactgccctggtcactgcttgatgttccaacacaggcttcgctcgtataaagaa
ttacccattagacttgccgactttggagtgttacatcgaaatgaggcaagtgaagctctt
agtggcttgacccatacccgacggttccaacaggatgatgcacacatattctgtacaaag
gatcaggttagtggagaattgaaacgtgcattggaattcgttgactatgtttacacaaaa
tttgggtttacctatgagctaaagctctcaacgagaccagagaagtaccttggagactta
acaacatgggatagagctgaaagggaccttgaagaagcactagaagattttggaaagcca
ttccttgtgaacagaggagccggggaattttatggcccgaagatagacataacagtatct
gatgcaatgaaaagctacgtccagtgcgctactttgcaacttgattttcaacttcctgcc
ctcttcgagctggaatacacagctatggctgaagggagttcggatacacctgtgatgata
catagagcggtgttaggctctgttgagcgtatgtttaccacattggtggagcattacaaa
ggaaaatggcccttctggcttagtccgcgccaggccatagtctgctcactgtcaaaggat
tctcatgaatacgctgaaaaggtgagagaacaaattcatgaagctgggtactatgttgat
gttgacataacagacagaaacatcagcaagaaggtgcgagaagctcaggttgcgcagtac
aactacatactggttgtgggtgctgaagaaactacaacgggacatgtgactgttcggcga
agaaacgaagacctttcagagttcccagtgctgagcgtcgagaatctgctggatgaattc
aaactcaagacggccaactttctctga
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