Brassica rapa (field mustard): 103842746
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Entry
103842746 CDS
T03449
Name
(RefSeq) myosin-5 isoform X1
KO
K10357
myosin V
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
103842746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103842746
04131 Membrane trafficking [BR:
brp04131
]
103842746
03029 Mitochondrial biogenesis [BR:
brp03029
]
103842746
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
brp04812
]
103842746
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
103842746
mRNA cycle factors
P-body specific factors
103842746
Membrane trafficking [BR:
brp04131
]
Others
Actin-binding proteins
Myosins
103842746
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
103842746
Cytoskeleton proteins [BR:
brp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
103842746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
TPR_MLP1_2
nSTAND3
Yuri_gagarin
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
103842746
NCBI-ProteinID:
XP_009117654
LinkDB
All DBs
Position
A09:complement(40978228..40988132)
Genome browser
AA seq
1513 aa
AA seq
DB search
MQAAPVIIVGSHVWVEDPHLAWIDGQVTRIDGQNIHVRTKKGKTVVTSVYFPKDTEASPG
GVDDMTKLSYLHEPGVLQNLETRYELNHIYTYTGNILIAVNPFQRLPHLYATDMMEQYKG
IGLGELSPHVFAIGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRSGV
EGRTVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLERS
RVCQISDPERNYHCFYLLCAAPPEDIKKYKLGNPQSFHYLNQSSCYELDGVDDASEYLET
RRAMDVVGISNEEQEAIFRVVAAILHLGNIDFGLGEEIDSSVIKDENSRFHLNLAAELLM
CNAQSLEDALIRRVMVTPEEIITKTLDPDNAIASRDTLAKTIYSHLFDWIVNKINTSIGQ
DPRSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWS
YIEFIDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFSNKLFQTFKGHERFSKPKLSQ
TDFTISHYAGEVTYQSNHFIDKNKDYIVAEHQALFTASNCSFVAGLFHALHEDSSRSSKF
SSIGSRFKQQLHSLMETLNGTEPHYIRCIKPNNILKPGIFENFNVIHQLRCGGVLEAIRI
SCAGYPTRLAFYDFLERFGLLAPEVLDGNYDDEVACQMILDKKGLRDYQVGKTKIFLRAG
QMAELDARRAEVLGNAARVIQRQFRTWIGRKKFRSIRNAAIVLQSFLRGEIARTVHKKLI
IEAAALRFQKNFRRYIARKSFVTNRSAAIVLQTGFKGMIARNEFRLRRQTKAAIVIQAHW
RGQRAYAYYIRLKKAAIVTQCAWRCRLARRELRMLKLAARETGALKDAKDKLEKRVEELT
WRLQLEKRLRTDLEEAKVQEVAKLQEALHTMRSQLKEATVMALKEQEAARMANEEASSVK
KEPVVVEDTAKIKSLSNEIEKLKGILSSETHRADEATQAYRSALVQNEELSKRLDEAGKK
INQLQDSVQRFQEKVSNLESENKVLRQQSLALSPASRALALRPKTTIVQMQRTPERFNFS
NGETKQVQEPETEDRPQKSLNQKQLENQELLLKSISEDIGFSEGKPVAACLIYKCLIHWR
SFEVERTNIFNRIIETIASAIEMQENDDVLCYWLSNSATLLMLLERTLKAGNIPPSRHRA
MSTSLFGRVSQSFIGSPQSVGFPFMNGRAIGGGLDELRQVEAKYPALLFKQQLTAYLEKI
YGVIRDRMKREIAPLLAVCIQAPRQPRSGLIKGRSHNNFEAQKALSAHWQSIVTCLNGHL
RTMRANYVPSLLISKVFGQIFSFINVQLFNSLVLRRECCSFSNGEYVKTGLAELEKWCHD
ATEEFAGSAWDELKHIRQAVGFLVIHQKPKKSLDEITTELCPVLTVQQLYRISTMYSDDK
YGTHSVSSEVMASMRQTVSEDTNKSFLLDDDSSIPFSLEDISKSMPNVEVAEIDPPPLIR
QNTSFMFLLERSD
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgctccggttataatagtgggctcgcatgtgtgggttgaagatccgcattta
gcatggatagatggacaagtcactcgcatcgatggtcaaaacattcatgtcagaactaag
aaaggcaaaaccgttgtgacgagtgtatattttcccaaggatactgaagcttcacctggt
ggtgtagatgacatgacaaagctttcatacttgcatgagcccggagtcttacaaaacctt
gagacgagatatgaactcaatcacatctacacatacacagggaatatcttaattgcagtt
aatccattccaaagactgcctcatctttatgcaaccgatatgatggaacaatataaagga
attggacttggagaactaagtcctcatgtttttgcaatcggtgatgctgcatacagggcg
atgattaatgaagggaagagcaattcgattttggtaagtggagaaagtggtgctggtaaa
accgagacgacgaagatgctcatgaggtaccttgcctttttgggagggaggtctggtgtt
gaaggaagaacagttgaacaacaagtcttagagtccaatccagttctggaagcatttggc
aatgcaaaaactttacggaacaacaattcgagtcgctttggtaaatttgttgaaatccaa
tttgacaagcatggaaggatatctggggcggctatcaggacttatctgcttgagaggtct
cgtgtttgccaaatctcagaccctgagagaaactaccattgtttttaccttctttgtgct
gctccaccagaggacataaagaagtacaagctgggaaacccacagtcgttccactatcta
aatcagtcaagctgttatgaactggatggtgttgatgatgctagtgaataccttgaaacc
agaagagctatggacgtagttggaatcagtaacgaagaacaggaggcaatcttcagggtg
gttgctgcgattcttcatcttggtaacattgattttggactaggggaagagattgattcc
tcggtcatcaaggatgaaaattcacgattccatcttaacttggccgcagagctacttatg
tgtaacgcccagagcctagaagatgctcttattagacgagtgatggtaacacctgaagag
attatcacgaaaactcttgatcccgataatgcaattgcgagtagggataccctggcaaag
actatatattctcacttgtttgactggatcgtgaataaaatcaatacttccatcgggcag
gacccaaggtcaaagtcaattattggagttctggatatctatgggtttgaaagtttcaag
tgcaatagttttgagcaattctgcatcaatttcacgaatgaaaaactgcagcagcatttt
aatcagcatgtttttaagatggagcaggaagagtacaccaaagaagagatcgactggagc
tacatagaatttattgataaccaagatgttcttgatttaattgaaaaaaaaccaggagga
atcatttcacttctagatgaagcctgcatgtttcccaagtctacacatgaaaccttctcc
aataagttgttccagacgttcaaaggtcacgagagattttccaaaccgaagctctctcag
actgattttacgatatcgcattatgcaggagaggttacttatcaatcaaaccattttatc
gacaagaacaaggactatatagttgctgaacatcaggcgctgtttactgcatctaattgc
tcctttgtggctggtttgttccatgcgcttcatgaagactcatccaggtcatcgaaattt
tcttccattgggtcacggttcaagcaacaacttcactcgctgatggaaacactgaatggt
acagaacctcattacatcagatgtataaagccgaataatattctcaaacctggtatcttt
gagaatttcaacgtcattcatcaattacgttgtgggggtgttcttgaggccattaggatc
agttgcgctggttatcctaccagacttgccttctacgactttcttgaacgttttggtctc
cttgctccagaagttttggatggaaattatgatgatgaagtagcttgccaaatgattctt
gataagaaaggtctgagggactaccaggttggaaagacaaagattttccttcgagctggt
cagatggctgaactagatgctaggagagctgaggttcttggaaatgctgccagagtcatt
cagaggcaattccgcacatggattggccgaaagaaattccgttctattcgaaacgctgca
attgtattgcaatcgttcctacgaggcgagattgcccggacagtacacaaaaaactgata
atcgaagctgcagctctaagattccagaaaaatttccgtcggtacatcgccaggaaatct
tttgtaaccaacagatcagctgcaatcgtgttgcagactggctttaagggcatgattgca
cgtaatgaattcaggttaagaaggcaaacaaaagctgccatagtgattcaggctcattgg
cgtggtcagcgagcatacgcatattacataagacttaagaaggcggcaatagtcactcaa
tgtgcctggagatgcagacttgctaggagagagcttagaatgctgaaattggctgcaaga
gaaactggtgctcttaaagatgctaaagataaattggagaagcgggtggaagagcttacc
tggcgtttgcaattagagaagcgattaaggactgatttggaggaggcaaaggtgcaagaa
gttgcaaagctgcaagaggctttgcacaccatgcggtcacagttgaaagaagcaactgta
atggcattaaaggaacaggaggctgctcgaatggcaaatgaagaagcaagttcagtaaaa
aaggaacctgttgttgttgaagatacagcgaaaatcaagtctttgagcaacgaaattgag
aagctaaagggaattttgtcatcagaaacacatagggcagatgaagcaacgcaggcttat
cgcagtgcattagtccaaaatgaggaattaagtaagagacttgacgaagctggaaaaaaa
ataaaccagcttcaagattctgttcagagattccaagaaaaagtctctaatttggagtca
gagaataaggtactccggcaacagtctcttgctctctcaccagctagtagagctttggcc
ctaagaccaaaaactaccatagttcagatgcagagaactcccgagagatttaatttctcc
aatggagaaacaaaacaagttcaggaacctgaaactgaggataggccccagaaatcgctt
aatcagaaacagctggaaaaccaggagctactactaaagtctatctcggaagatattgga
ttttctgaaggcaagcctgttgctgcatgcctgatatataagtgtctgatacactggaga
tcttttgaagtagaaaggaccaatatatttaatcgtataatcgagactatagcatccgcc
atcgagatgcaggaaaacgacgatgtactatgctattggttatccaattccgccacactt
ttaatgttgcttgaacgcactctgaaagccggtaacatacctccctcgagacatcgggcc
atgtctacatctttgtttggacgggtatctcagagtttcataggctctccacaaagtgtt
ggattcccattcatgaatggaagggcgattggtggtgggctagacgaactacgtcaagtg
gaagctaaatatcctgctttgcttttcaagcagcagctcaccgcttacctagaaaagatt
tatggagtgatccgagaccggatgaagagagagattgcgcctttgcttgctgtttgcatt
caggcaccaaggcaaccacgttctggtttaataaaaggacgctcacataataattttgag
gctcaaaaagcgctaagtgctcattggcaaagcattgtcacatgtttaaacggccacttg
aggactatgagggccaattatgtgccttcgttgctaatttccaaagtgttcgggcagata
ttttcatttatcaatgttcagttgtttaacagccttgttttgagacgtgaatgctgctcg
tttagcaacggagagtatgtaaaaacaggacttgcagagcttgaaaagtggtgccatgat
gcaactgaggagtttgctggttcggcttgggatgaactaaaacacatcagacaagctgtt
ggcttcttggttatacatcagaagcctaagaaaagcttagacgagataactactgaactt
tgtccggtgcttaccgtgcagcaactttacaggatcagtactatgtattcagacgataaa
tacggaacacatagcgtatcttccgaggtgatggcaagcatgaggcagacggtttcagag
gataccaacaagtcatttttactagacgacgattcaagcatcccattctcgcttgaagac
atctcgaaatcgatgccaaacgtagaggttgcagagatcgatcctcctccattgattcgc
caaaacaccagcttcatgttcttgttggaaaggtcagactga
DBGET
integrated database retrieval system
