Brassica rapa (field mustard): 103842750
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Entry
103842750 CDS
T03449
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103842750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103842750
03036 Chromosome and associated proteins [BR:
brp03036
]
103842750
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103842750
Coactivators
SAGA/TFTC/STAGA complex
103842750
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103842750
STAGA complex
103842750
TFTC complex
103842750
SAGA complex
103842750
SLIK complex
103842750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
DUF5814
Motif
Other DBs
NCBI-GeneID:
103842750
NCBI-ProteinID:
XP_009117660
LinkDB
All DBs
Position
A09:41023951..41027219
Genome browser
AA seq
591 aa
AA seq
DB search
MAEPIRSSSLSPRPLQSPNPMEPSLTSSAPPPSSLQHQRQRYVTAPVSNSAASPAIAPTT
TEGVIQNMASPSPVEQQTQSQQLARTQQLPIMQQSPMSNYHIAPSPSVNQIQQQQGQYGG
VLRQQGQYGDVLRQQGQYVDVLKQQGQYGDVLRQQGEMYGTMDFVGGSGQSGHLSMLNGG
AGAAQMNIHQSQSLASSSPRQQSGLVHGSQFHPGSSEQQLHGIGVMESLILRSQMRANPA
LYPQHRTNPGHMRSQQHVLTLPQVQNFQRTPSLAFINAQLSGLAQNGQAGMVQNSLTQQQ
QWLKLISEINSPNSQSFRLQPSQRQALLLQQQFPSAQLHQNSMPLNQQQISHIIHQQSQM
NQAQMNPSQLQQMQQPQQQQIPINQQQPSPRMPSHAGQRSVGLTGSQPDATEPGATTPGV
VRSSQGPEATNQLLGKRKLQDLVSQVDAHAKLDPDVEDLLLELADDFLDSVTSFACRLAK
HRKSTILEPKDVLLHLEKNLQLTVPGFSSQNKHQTKNVPTDLHKKRIAMGQKLRALVESS
LQGTNASNSKETFRHLMVNPNGANHLLRPSPTSEQLVSQTPGPRMLRHMKR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacctattcgttcgtcgtcgttgtcaccgagacctctccagtctcctaaccca
atggagccttcccttacttcctccgcacctccaccgtcgtcattgcaacatcaacgacaa
cgatacgtgacagctccggtttcgaattcagcagcgtctccggcgattgctccaacgacg
accgaaggtgtaattcagaacatggcgtctccttctccggtggaacagcagacacagagt
cagcaactcgctcgaactcagcagttgcctattatgcagcaatcaccaatgtcgaattac
cacatagctccatccccttccgttaaccaaattcagcagcagcaaggtcaatacggtggc
gttttgaggcagcaaggtcaatacggcgacgttttgaggcagcagggtcaatacgttgac
gttttgaagcagcaaggtcaatacggcgacgttttgaggcagcaaggtgagatgtacggg
acgatggactttgttggtgggtcaggccaaagcggccacttgtcaatgcttaacggtgga
gctggagcagcccagatgaatattcaccaatcccaatcattggcatcttcctcgccgagg
caacaatctggtctagtccatggctctcagtttcatccaggaagttctgaacaacagtta
catggtattggggtgatggaatcattgattttgaggtcgcaaatgagagctaaccctgcc
ctctatcctcagcaccgaaccaacccgggacacatgagatcgcagcaacacgttcttact
ttacctcaggtccagaacttccagagaacaccttccctcgcattcatcaatgctcagcta
tctggtttggcccaaaatggacaagctggtatggttcaaaactcattgacgcagcagcag
caatggctgaagctaatttcggaaataaacagccccaattcacaatcattccggcttcaa
ccgagtcaaaggcaggctctactcttacagcaacagtttccctctgctcagctgcaccaa
aactctatgcctttgaatcagcagcaaatatcgcatattatacatcaacaatcacagatg
aaccaggctcagatgaacccatctcaactacaacagatgcagcaaccccaacagcagcaa
attccaataaatcaacaacagccatctccaaggatgccgagtcatgcaggacagagatct
gttggtttaacaggctcacaaccagatgcgacagagccgggtgcgacaacaccaggtgtt
gttaggtccagccaaggaccagaagcaacaaaccaactgcttggcaaaagaaaattacag
gatctggtttcacaggtggatgcacatgctaaattggatcctgatgttgaagacctcctt
ttggagctagcagatgatttccttgattcggttacttcatttgcatgtagattggctaag
catcgtaaatcaaccatattggagccaaaggatgtattactccacttagagaaaaacttg
cagttgacagttcctggattctcaagtcagaataaacaccaaacaaaaaacgtaccaact
gatctccacaagaagcgaattgcaatgggtcaaaagctgcgtgctttggtggaatcgtca
ctacaagggacgaatgcaagcaactcgaaggaaacttttagacatttgatggtgaaccca
aatggtgcaaaccatctcttaagaccatctcccacttcagagcaattggtttcgcagaca
ccgggtcctcgtatgttacgacatatgaaacgttga
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integrated database retrieval system
