Brassica rapa (field mustard): 103842813
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Entry
103842813 CDS
T03449
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103842813
Spliceosome [BR:
brp03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
103842813
Other components
Complex C specific factors
103842813
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GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
103842813
NCBI-ProteinID:
XP_009117727
UniProt:
M4ED31
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All DBs
Position
A09:complement(41195870..41198539)
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AA seq
837 aa
AA seq
DB search
MDEYQEMERFGMENDFEGGRWENGEFVYEKRKEKRKQTKHDATYGVFAESDSDSDDSSGG
GGRRKKNRRDLDSGRKADLTKPVNFVSTGTVTPNQEVDKDSNDEEDDMVVDDDSEVRGGL
GAGRSGLGLGFGGLGFDDEDSLLPGAFGKKIAEGAKMREKAKMEKRGQEGGAKGGKKEGL
GGGDIGKFEKATKGIGMKLLEKMGYKGGGLGKNQQGIVAPIEAQLRPKNMGMGYNDFKEA
KLPDLKKVEEKKTVTVGWNDQSHGDRGGKNLWKKKKARKEVYVTAEELLEKKQEEGFGGG
QTIIDMRGPQVRVVTNLENLDAEEKAREADVPMPELQHNLRLIVDLVEHEIQKIDRDLRN
ERESALSLQQEKEMLIKEEEKQKTHLDNMEYIADEISRIELENTSGSLTLDSLANRFEDL
QTTYPHDYMLCNLSTIACSLALPLFIRMFQGWDPLRDAGHGMKAISSWKKLLEVEENQNI
WVISTPYSQLVSEVVLPAVRIAGINTWEPRDPEPMLRFIETWEDLLPSSVMDTILDTVVL
PKLSTAVEYWDPRREVVAIHVWVHPWLPRLGQKLEFLYQIIQMKLSNVLDAWHPSDPSAY
TILSPWKTVFDATSWEQLMRRYIVPKLQLALQEFQVNPANQNLDQFNWVMKWASAVPIHL
MADLMERFFFPKWLDVLYHWLRAKPRFDEIHNWYYGWKKSFPQELSANERIRIQLKRGLD
MLMEAVEGVEVSQPRAKAQEQRHFEPARAQAKAQMDSNEVLSLKEVLEVFAQEKELLFKP
KPNRMHNGLQIYGFGNVSVVIDSVNQKLLAQKDGGWYLVTPDDLLRMHNNASVSGKR
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtatcaagagatggagaggttcggcatggagaacgacttcgaaggaggccgc
tgggagaacggcgagttcgtatacgaaaagcggaaggagaagcggaaacaaaccaagcac
gacgctacttacggagtcttcgccgagagcgattcggattccgacgattccagcggcgga
ggaggtcggaggaagaagaatcgcagggatctggattcgggaaggaaggccgacttaacc
aagcctgtcaatttcgtttctacaggtactgttacgccgaatcaagaggttgataaggat
tctaacgatgaggaggatgatatggttgttgatgatgatagtgaagttagaggtggattg
ggtgctggaaggtcaggtttagggttagggtttgggggattaggttttgatgatgaggat
agtcttttacctggtgcttttgggaagaagatagctgagggggcgaagatgagagagaag
gctaagatggagaagagaggtcaagagggtggtgcaaagggagggaagaaggagggttta
ggtggtggtgatataggtaagtttgagaaggctactaaaggaattggtatgaagcttctt
gagaagatggggtacaagggaggtggtcttgggaagaaccagcaaggtattgtggctcct
attgaagctcagctgaggccgaagaatatgggtatggggtataacgatttcaaggaggcg
aagttgcctgatttaaagaaggtggaggagaagaagactgttacggttggttggaatgat
cagagtcatggtgatagaggagggaaaaatctctggaagaagaagaaggcgaggaaggaa
gtttatgtcactgcagaggagctgttggagaagaagcaggaagagggttttggtggtggc
cagaccattattgatatgcgaggaccacaggttcgggttgtgacgaatttggaaaattta
gatgcagaggagaaagcaagagaagcagatgttcctatgcccgagttacagcacaacttg
cgactgattgttgatttagtcgaacatgaaattcaaaagattgatagggacttgaggaac
gagagagaatcagccttgagcttgcagcaggagaaggagatgcttataaaggaggaagag
aagcaaaaaacgcacttagacaacatggagtatatcgcagatgagataagtcgaatcgaa
ttggaaaatacgtctgggagtttgacgcttgattcacttgctaatcggttcgaggacctg
cagacaacctatcctcatgattacatgctttgcaacttgtcaaccatcgcttgctcactg
gccttgcctctctttatcagaatgtttcagggttgggaccctcttagggatgcagggcat
ggtatgaaggcaatatcttcttggaaaaagcttttggaagtcgaggaaaatcaaaatata
tgggtaatctcaacgccttacagtcaactagtctcggaggtagtgttacctgctgtgcgt
atagctggcatcaatacctgggaaccgagagaccctgagccgatgcttagattcatagag
acatgggaagatctgctgccttcatctgtcatggatacgattttggacacagtagtgctg
ccaaaactgtcgactgctgtggaatattgggacccacgaagggaagttgttgcgatccat
gtttgggtacatccttggttgccaagacttggtcagaagttggagtttctgtatcagatc
attcagatgaaactgagtaatgttcttgatgcttggcatcctagtgatccatccgcctac
actattctctctccatggaagacggtttttgatgctacaagctgggaacagcttatgcga
cgttacatagtccccaaacttcagctggccttgcaggagtttcaggtgaatccggcaaac
cagaatttagaccagttcaattgggttatgaagtgggcatctgcagtgccgattcaccta
atggctgatctgatggagaggttcttcttcccgaaatggctggatgtgttgtaccactgg
ctgcgtgccaaaccgaggttcgacgagatccacaactggtattacggctggaaaaagtca
ttcccgcaagagctttcagcaaacgagaggatccgaatccagttgaagcgtggtttagat
atgttgatggaagctgttgaaggagttgaagtgtctcagccaagggcgaaggcacaagag
cagagacactttgagccggctcgggctcaggctaaggctcagatggatagcaacgaggtg
ctgagtttgaaagaagtgttggaagtgtttgcgcaagagaaggagttgctgttcaaacct
aagccgaataggatgcacaatggtcttcagatttatgggtttgggaatgtgagtgtggtg
atagactcggtgaaccagaagctgttggctcagaaagatggagggtggtatcttgtaact
cctgatgacttattgaggatgcacaacaatgcaagtgtctctggaaaacgttag
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