Brassica rapa (field mustard): 103842854
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Entry
103842854 CDS
T03449
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103842854
Enzymes [BR:
brp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103842854
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
90S particles
Helicases
103842854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
103842854
NCBI-ProteinID:
XP_009117769
UniProt:
M4ED64
LinkDB
All DBs
Position
A09:41382336..41385322
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AA seq
486 aa
AA seq
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MEEPTSSSEECGITIIAKPRKKTLNPQTQLPKLDPTPQFEKFTSTDATTSASNFESLGLS
EWASETCKELGMRKPTPVQTHCIPKILSGRDVLGLAQTGSGKTAAFALPILNRLAEDPYG
VFALVVTPTRELAFQLAEQFKALGSCLNLRCCVIVGGMDMLTQTRSLISRPHVVITTPGR
IKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFNCLPKTRQTLLFSATMTS
NLQTLLEHSSNKAYFYEAYEGLKTVDTLKQQYIFIDKDAKELYLVHILSQMEDKEIRSAM
IFVSTCRTCQRLSLMLEELEVENAALHSLNSQSLRLSALSKFKSGKVPILLATDVASRGL
DIPTVDLVINYDIPRYPRDYVHRVGRTARAGRGGLAVSIITETDVNLIHEIEAEVGKQME
LYNYREITDSLEVTKVSKAKRVAMMKMLDDGFEDKVKDRRKLKRKTLADKGMLKKRSKTR
KSAEEK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacccacgtcgtcttcagaagaatgcggaatcacaatcatcgccaaaccccgc
aaaaaaaccctaaacccccaaacccaactcccaaaactcgaccccactccccaattcgag
aaattcacaagcaccgacgccaccacatccgcctccaacttcgaatccctcggactatcc
gagtgggcctccgagacctgcaaggagctcggcatgcgcaaacccactccggtccagacc
cactgcatccccaagatcctatccggacgagacgtcttgggcctcgcgcaaaccggtagc
ggcaaaacggcggcgtttgcgttgccgatactcaaccgcctcgcggaagatccttacgga
gtgttcgcgctcgtggtgacgcctacgagagagctggcgttccagctcgctgagcagttt
aaggcgttggggtcgtgtttgaatctgcggtgctgtgtgattgtgggagggatggatatg
ctgacgcagacgaggagcttgatctcgcggcctcatgttgtgattacgacgcctgggagg
attaaggttttgcttgagaataatcctgatgttcctcctgtcttctctagaactaagttc
ttggtgctggatgaggcggatagagttcttgatgttggtttccaagacgagttgcgcacc
atctttaactgcttgcccaaaactagacagacgttgctgttctctgctacgatgacgagt
aacttacagactttgcttgagcattcttcaaacaaagcttacttctatgaagcctacgaa
gggctaaagaccgttgatacgctgaagcagcagtacattttcatagacaaagatgcgaaa
gagctgtaccttgtgcacatcttgtcgcaaatggaagacaaggagattcgatcagccatg
atttttgtctccacttgcaggacatgtcaaaggttgagtcttatgcttgaagagctcgaa
gtggagaatgcagctttgcattcactgaactctcagtctttgcgactctctgcgctcagt
aaattcaagtccgggaaagtaccgatactgcttgccactgatgtagccagccgtggattg
gatattcctactgttgaccttgtaatcaattatgacattcccagatatccgagggattat
gttcatcgtgttggacgtacagctagagctggtagaggaggactggctgtaagcattatc
actgagaccgatgtgaaccttattcatgaaatagaagcggaagttggaaaacagatggaa
ctgtacaactacagagaaatcactgacagtttagaagtcacaaaggtatcaaaagctaaa
agggtggcaatgatgaagatgctagacgacggatttgaagacaaggtcaaagaccggagg
aaactgaagcgtaagacactcgcggataaagggatgctgaagaaacggagcaaaacgaga
aaatccgcagaagaaaagtga
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