Brassica rapa (field mustard): 103842913
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Entry
103842913 CDS
T03449
Name
(RefSeq) uncharacterized protein LOC103842913
KO
K17925
sorting nexin-13
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
brp04990
]
103842913
Domain-containing proteins not elsewhere classified [BR:
brp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
103842913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
103842913
NCBI-ProteinID:
XP_009117842
UniProt:
M4EDB6
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All DBs
Position
A09:complement(41609980..41615261)
Genome browser
AA seq
1017 aa
AA seq
DB search
MSSQKQAVTVRDLVEEAKKRIVILVICVVGLSYLLSLTSSSVWVNLPAAACLIILLRYFS
FDVEMKRKAAAYNNKPSSLSGPSLSKPPELPKAAPRSDWRSKVNSQVVEDALDRFTRHLV
SEWVLDLWYSRITPDKQGPEELVFIINHVLGELSRRFRNVNLIDLFTRDIIDIICRHVEL
FRECQAKIERKRRRSLSFEERDSELRRVMATNDKLHPALFSPESEHKVLQHIMDRLISLT
FRPEDMHCAFFHYTVRELLACCVMRPVLNLANPRFINERIEAAVMSRTKTNGGSSAAKET
SQSEDLSEVSHDHFSRYMDPSVTGVELVQLKHEQKKRKNATDKQHVADLAKDPLLSMDTR
SSRSWESLPLTSKIVDDSKYLQGHRGGEGWGDVLEKMSQRKTETLSPEHLESVWAKGRNY
KKKEGERVPPRLSIKESCNDGDNARPKNFNENTVNARGSSQPKVVDSHLSSYSSAEEDEE
TKSSHSSTSEDEETVTGLNSPGTRVWDGRTNKNPSVSRIHHPLENSGRRFKQTSKGHERY
EKASRHQSSRKRSKRSGLILGDDDSDDSEHDSLARSYSGISATSSASYNSMPESDLLSAP
RSSLLVDSFAKLRCEVMGANIVKSSSKMFAVYSISVTDDSNHSWSIKRRFRHFEELHQRL
KVFPEYNLYLPPKHFLSTGVDIPVIHERCVLLDTYLKKLLQLPRISGSIEVWDFLSVDSQ
TYAFSSSFSIIETLTVKPARKTSTVPTSIANMTEATPAPLPSRENLSSENGKSGQHVRNN
VMVDDLKSKVKAPGNDHTKTSDADVRNSKENGGLKVGNQAVAMALPGLPTEWVPPKLTLP
LLDLVDVVLQLQEGGWIRRKAFWVAKQILQLGMGDALDDWVLEKIRLLRRGTVVASGIQR
VEQILWPDGIFMTKHPKRKQQSSTSDEEQQQEAERRAKFVHELMIEKAPATIVSLVGQNE
YKQCAEDLYFFLQSSVCLKQLAFDLLELLLLSAFPEMEKAFKQLHEEKHLFGQYTSN
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccagaagcaggcggtgacagttcgtgacctggtagaggaagccaagaaacga
atcgttatactggtgatatgcgtcgtcggactctcatacctcctctctctgacgagttca
tcggtttgggtcaacctccctgctgctgcgtgcttgatcatcctccttcgttacttctca
tttgacgtcgaaatgaaaagaaaggctgcagcttacaataacaaaccgtcttcactgagt
ggaccgtctctaagtaaacctccagagcttcctaaagcagctccacggtctgactggaga
agtaaagtgaactcacaggttgttgaggacgcattggatcgcttcacccgtcacctcgtt
tcggaatgggtgcttgatctctggtactcccggataactccggataagcaaggtcctgag
gagctggtgtttattattaaccatgttcttggagaactttcgcggcggtttaggaacgtt
aatcttattgatctgtttacaagggatataattgatattatatgtcgtcatgtggagctt
ttccgtgaatgtcaagcaaagattgagagaaaacgaaggagaagtctcagcttcgaagag
agagactcagaacttagacgtgtgatggccacaaatgataaattgcaccctgcattattc
tcccctgaatctgagcataaggttttgcaacatataatggacagactcatttcacttaca
tttaggcctgaggatatgcactgtgcttttttccattataccgtgagggagcttcttgct
tgctgtgtgatgcgaccagtcttaaatttagccaatcctcggttcattaatgagaggatt
gaagctgctgtgatgtcaaggacaaagactaatggcggatctagtgctgcaaaagagact
tctcaatctgaagatctctcggaagtttctcatgatcatttttcgagatatatggatccc
tctgtcacaggtgttgagcttgtgcaactgaaacatgaacagaaaaaaaggaagaatgct
acagataaacagcatgtagcagatttggccaaagatccattgctttcaatggacactcga
tcttcccgatcgtgggagtccctccccttaacttccaaaatagttgatgatagtaaatat
cttcaagggcatcgaggaggagagggatggggtgacgtattagagaagatgtcacaaagg
aaaactgagaccctttctccagagcatcttgaaagcgtgtgggcaaaaggaagaaattat
aaaaagaaggaaggtgagagggtgcccccgagactttctatcaaggaatcgtgcaacgat
ggtgataatgcacggcctaaaaacttcaatgaaaacactgtgaatgcaagaggatccagt
cagcctaaggtagtagacagtcacttatcaagttattcctctgctgaagaggacgaggaa
acaaaaagtagtcattcttctacatctgaggacgaggaaacggtaacaggtctaaacagt
cctgggactcgagtctgggatggtcgaacgaacaaaaatcctagtgtttcacggatacac
catccacttgaaaattctggtcgtcgtttcaaacagaccagtaaagggcatgaacgttat
gagaaagcatccaggcatcagtctagcaggaagagatccaaacgttctggactcattcta
ggcgatgatgatagcgatgattctgaacatgattctttggcgagatcatacagtggaatc
tctgcaacatcgtctgcatcatacaattcaatgccagaaagtgaccttctcagtgcccct
agaagttctttgttggttgattcctttgccaaattgagatgtgaggttatgggtgccaat
attgtgaagagtagttctaagatgtttgccgtgtattcaatttccgtcacagatgatagt
aatcatagctggtctatcaaaagaagatttcgacattttgaagagcttcaccagcggctt
aaagtgtttcccgagtacaatctttatttaccgccgaagcatttcctatcaacaggcgtg
gacatacctgttatacacgagcgatgtgtactgcttgatacctatctcaagaagcttttg
caactaccaagaatttcaggatcaatcgaagtgtgggatttcctcagtgtggattcccag
acttacgccttctcaagttctttctctatcattgagacgctcacggttaaacctgcccgt
aagacatctacagttcctacaagtatagccaatatgaccgaggcgacgccagctcctctt
ccttcgagagaaaacctgagttcagagaatgggaaatcgggtcaacatgtgaggaataac
gttatggtggatgatctgaagtcaaaagtgaaagctcctggaaatgatcatacgaagacg
tctgatgcagatgtgagaaatagcaaagagaacggcgggcttaaagtgggtaatcaagct
gttgcaatggccttacccggcctgcccacagagtgggttcctccaaagctaacattgccc
ctactagacttggtagatgttgtcttacagctccaggagggtgggtggatcaggcggaaa
gctttttgggttgccaaacagatacttcaacttgggatgggcgatgcattagacgattgg
gtactcgagaaaattcgtcttttgcggcggggaactgtagttgcttctggaattcagcgg
gttgaacagatactatggccggatgggatatttatgacaaaacatccaaaaaggaagcaa
caatccagtacttctgacgaggagcagcaacaagaagcagagagacgagccaagtttgtt
catgaattaatgattgaaaaagccccagcgactatagtgagccttgtgggtcaaaacgag
tataaacaatgtgcggaagacctctacttcttccttcagtcatcagtgtgtctaaagcaa
ttggcatttgaccttctggagctgttgctactctctgcgtttccggaaatggagaaggct
ttcaaacagttgcatgaagaaaaacacctctttggtcaatacacatcaaactga
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