Brassica rapa (field mustard): 103842994
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Entry
103842994 CDS
T03449
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103842994
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
103842994
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
103842994
NCBI-ProteinID:
XP_009117928
UniProt:
M4EDJ2
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All DBs
Position
A09:41963749..41966330
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AA seq
485 aa
AA seq
DB search
MASTLRNIHGKRSNFQSEFPGNGGSKRRNLHDDDTDHNVIGSEDTVYRYLCPVKKTGSII
GKGGEIAKQIRSETKSNMRINEALPGCEERVVTIYSTSDELNHFGDDGELVCPALDALFK
VHDMVVADSNDNDDDDDGDEDLVGKQMVTVRMLVPSDQIGCVIGKGGQVIQKLRTETNAQ
IRVIKDNLPPCALTLSHDELLQIIGEPLVVREALYQVASLLHDNPSRFQHSLLSSPSTMY
QPGGMLMCAPLTSSHRNYTARRDVADATEFCVCFICPAENVGGVIGKGGGFINQIRQETG
ATIRVNTSETEEDDSIIFISSKEFYEDQSPTVNAAIRLQERCSEKVGKDTNDATISTRLL
VSSSHIGCLIGKGGAVISEMRSVTRANIRILQKENVPKIAREDEEMVQITGSPDAAMKAL
TQVVLRLRANAFDMNHGLVLLPTSFPYIPQVSESSNRSKYAKRDGSRDQDYSKLSSNSKR
RNHVS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctagtactctgaggaacatccatggtaagagatctaacttccaatctgagtttcct
ggaaatggaggaagtaagagaagaaatcttcatgatgatgatacagatcacaacgttatc
ggctctgaagacactgtctatcgttacttgtgccctgtgaaaaagactgggagcattatc
ggcaaaggcggtgagatcgcaaagcagataaggtcagagacaaagtcaaacatgaggatc
aacgaagctttgcccggttgtgaggagcgtgttgttaccatatattccactagtgatgag
ttgaatcattttggagacgatggagagcttgtttgtcctgctttggatgctcttttcaag
gttcatgacatggttgtagcggacagtaatgacaatgatgatgatgatgatggtgatgag
gatcttgttggaaaacaaatggttactgtgaggatgcttgttccttcagaccagataggt
tgcgttatcgggaaaggcggacaagttatccagaagctgcgtaccgaaaccaatgctcag
attcgtgtcattaaagataacctacctccctgtgctttgactttgagccatgatgagctt
cttcagattattggagagcctctggttgttagagaggctctttatcaagttgcttcactg
cttcatgataacccgtcgcggtttcagcactctctcctctcttctccaagtacaatgtat
caacctggtgggatgttgatgtgtgcaccattaaccagctctcacagaaactacactgca
cgcagagacgtagcggatgcgacggagttttgtgtttgtttcatctgtccagctgaaaat
gttggaggtgttatagggaaaggaggtggtttcattaatcagatcaggcaagaaactggt
gcaaccattagagtcaatacctcggaaactgaagaagatgatagcatcattttcatttca
tcaaaagagttctatgaggatcaatcaccaacggtgaatgcagccatacgtttacaagag
agatgcagtgagaaagttggtaaagatacaaatgatgcaacaatctccactcgtttactt
gtgtcgagctcccatatagggtgcctaattggaaaaggtggtgctgttatatccgagatg
aggagtgtaacacgagctaatatacgtattcttcaaaaggaaaatgtaccaaaaattgca
cgtgaagatgaggagatggttcagattactggaagtcctgatgcagctatgaaagctctt
acgcaagtggtcttgcgattaagagctaacgcttttgacatgaatcatggacttgtcttg
cttcctacatctttcccatatattcctcaagtatctgaatcttcaaacaggtccaaatac
gcaaagcgtgatggttccagagatcaagactatagtaaactgagttcaaattccaagaga
agaaaccatgtttcttaa
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