Brassica rapa (field mustard): 103843069
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Entry
103843069 CDS
T03449
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103843069
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
103843069
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
SDA1_dom
YL1
TEX19
Motif
Other DBs
NCBI-GeneID:
103843069
NCBI-ProteinID:
XP_009118018
UniProt:
M4EDR1
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All DBs
Position
A09:complement(42297357..42301628)
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AA seq
808 aa
AA seq
DB search
MSGSLGRTPESLKASGRSSEKLSLPILQGKIKRDPDGYETELQLIYKQFKASVDLFQQQA
ALSFSSVGSDPSVAKDLGDRAMFLAHVTPFYPKQLAEFPAQLTDLLRTSCLAMPSGLRNH
VSQALILLMNRKSLVIEDLLALFLDVQCIGDRNLRKLAFSHIVQTIRKMSVTDPRHKGLQ
KIVISMLEQEDETKAKRALVTLCELLKKKVWLGDRHERVAIAICEACFHASPRIMVSSLR
FLLDYENIEDEDDSDASDNDDDEDSKPENHVVINREAVYKANNKGTSSSKKKKQAKLQRA
MKSIKKKQRASSESTTSTYSPLNHLNDPQKFAEKLLSRLQTGKSIGKTSERIETRLMMMK
VIARTIGLHKLQLLSFYTYLQNYAKPHEKDVTQILAAAVQACHDGVPSDAVKPLFMQIVN
QFVHDRSRPEAIAVGLNVIREMCLRIPELMTEELLQDLALYKKEHEKAISAGARSLIALF
REINPSLLVKKDRGRPGGPVAKPKQFGEANVFSDVPNVELLQESDHESDSDDGDEEDDDV
ELPGSDDVEQEELVPDDCGNEDEAEEDSDDDMNNTEDDSDVDTSIAGDDEEEDMNDSNEA
ETDSENEEMESEEDDDDGEASDSSEEDSGSKEKAKGKKRKMVDFDANLLSADTSLRALKR
FAEAKSEQPSLDENDGILSNEDFRKIKDLQAKKEAKLALARKGFKVPDSDQLSKKRVNPA
KLEAHIRHKLTKEQRMELVKAGREDRVKYQSRTATKQKKVGGSSNKQKEHKKNMPLAAIR
SKAGRSKRSKKMKKSNSGTQFRGRKAWK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatctctaggccgcacgccggagtccttaaaggcctccggccggagctccgag
aagctcagcctccccatcctccagggcaaaatcaagcgcgacccggatggatacgaaaca
gagctccaactaatctacaaacagttcaaagcctccgtcgatctcttccagcagcaagcc
gccctcagcttctcctccgtcggctccgacccttccgtcgccaaagacctcggcgaccga
gccatgttcctagctcacgtcactcccttttaccctaagcagctcgcggagttcccagct
cagctgactgatttgctccgcacctcgtgcctcgcgatgccctcggggctgaggaaccac
gtctctcaggcgttgattcttcttatgaatcgaaagagtcttgtcatcgaggatttgctg
gctctgtttctggatgttcagtgtattggtgatagaaacttgaggaagcttgcgttttct
cacattgttcagaccattcgtaagatgagtgttactgatccgaggcataagggacttcag
aagattgtcatctccatgttggagcaagaagatgaaacaaaggctaagagagcacttgtt
actctatgtgagcttctcaagaagaaggtttggcttggtgatagacatgagagagttgct
attgccatttgtgaagcttgctttcatgcttcgcctaggatcatggtatcttctcttcgg
tttcttcttgactacgagaacattgaggatgaggatgatagtgatgcttcagacaacgac
gatgacgaggattcaaagcccgaaaaccatgttgtgattaacagggaggctgtttacaag
gcgaacaacaaaggtacatcttctagcaagaagaagaagcaagcgaaactgcaacgtgcg
atgaagagtattaagaagaagcagcgtgcttcgtccgagagcaccacttcaacttattca
cctctcaatcatctaaatgatcctcagaaatttgcagagaaattactttctcgtcttcag
actggcaagagcattggcaaaactagtgaacgaattgagaccaggttaatgatgatgaaa
gttattgcacgaacaattgggcttcacaagttgcaattattaagcttttacacttatctt
caaaactacgctaagccacatgaaaaggacgttacacaaatacttgcagcagcagttcag
gcttgccatgatggggttccttctgatgctgtgaaaccactgttcatgcaaattgtgaat
cagtttgtacacgaccgttcacgtcctgaggctattgctgtcggactcaatgtgattcga
gaaatgtgcctgaggattcccgagttgatgacagaagagttgctgcaagatcttgctctg
tataaaaaggaacatgaaaaagccatatccgcaggagcccgttccctcattgcattgttc
agagagatcaatccttcgcttctagtgaaaaaagaccgtggccgtcctggaggtcccgtt
gccaaacctaaacaattcggagaagctaatgtcttcagtgatgttcccaatgttgagtta
ttgcaagaaagtgatcatgagagtgactctgatgatggtgatgaagaagatgatgacgtg
gagttgcctggcagtgatgatgtcgagcaggaggagctggtgcctgatgattgtggaaac
gaggacgaagctgaagaagattctgatgacgatatgaacaacactgaagatgacagtgat
gttgatacttccatcgcgggtgacgacgaagaggaagatatgaatgacagtaatgaagcc
gagactgattctgaaaacgaggagatggaaagcgaagaagatgatgatgatggagaagct
tctgattcttctgaagaagatagtggaagcaaagagaaggccaaggggaagaaaaggaag
atggttgatttcgatgcgaatctcctctctgctgatacaagcctacgagcacttaagagg
ttcgcagaagccaagagcgagcagccttctttggatgaaaacgatggcatactttccaat
gaggacttccgaaaaatcaaagatcttcaggcaaagaaggaagcaaaacttgcattggct
cgaaaagggttcaaggttccggattctgatcagctaagtaagaagcgtgtcaatccagcc
aaacttgaagctcacataaggcataaactaacaaaggagcagagaatggagttagttaaa
gcgggtagggaggacagagtgaaataccaatccaggactgccaccaagcagaagaaggtg
ggaggatcgagcaataaacagaaggagcacaagaagaatatgcctcttgctgcgataaga
tcaaaggctggtagatcaaagcgatccaagaaaatgaagaaaagcaacagcggaacccag
ttcagaggaaggaaagcttggaaatga
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