Brassica rapa (field mustard): 103843398
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Entry
103843398 CDS
T03449
Name
(RefSeq) calreticulin-3
KO
K08057
calreticulin
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04141
Protein processing in endoplasmic reticulum
brp04145
Phagosome
brp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103843398
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103843398
04148 Efferocytosis
103843398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
brp03110
]
103843398
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
brp04091
]
103843398
Chaperones and folding catalysts [BR:
brp03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
103843398
Lectins [BR:
brp04091
]
L-type lectins
103843398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
103843398
NCBI-ProteinID:
XP_009118375
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All DBs
Position
A09:43485523..43495109
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AA seq
425 aa
AA seq
DB search
MGLPQNKLKSFCIFIFSLLTLTPLAFSEIFLEEHFEGGWKSRWVLSDWKRNEGKAGTFKH
TAGKWPGDPDNKGIQTYNDAKHYAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKL
LSGYVNQKQFGGDTPYSLMFGPDICGTQTKKLHVILSYQGQNYPIKKDLECETDKLNHFY
TFILRPDASYSVLVDNKEREFGSMYTDWDILPPRKIKVKNAKKPVDWDDREYIDDPEDVK
PEGYDLIPREIPDQKAKEPEDWDEEENGHWEPPKIPNPAYKGSWKAKKIKNPEYKGKWKN
PWIDNPEFEDDPDLYVLKPIRYAGIEVWQVKAGSIFDNILISDDPEYARSMVDDYFAQHR
ESEKELFAEAEKEKKAREDEEARIAREEGERRRKERGDRYGHRDRRHRYKRHHRRGYMDD
YHDEL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggattgcctcaaaacaagctcaagtctttctgcatcttcatcttctctcttctcact
ctcactccattagctttctcagagatcttcttagaggagcatttcgaaggtggatggaaa
agcaggtgggtcttatctgattggaagagaaacgaaggcaaagccggtacctttaagcac
accgccggtaaatggcccggcgatcctgacaataaaggtattcagacatataatgatgcc
aagcattatgcgatatctgcaaagattccagagtttagcaacaagaaccggacacttgtt
gtccagtactcagtcaaaatcgaacaagacattgaatgtggtggcgcttacatcaagctc
ctctctggctacgttaaccagaagcaatttggtggtgacactccttacagtctaatgttt
ggaccagacatatgcggcacgcagacaaagaagcttcatgtgattctttcataccaggga
cagaactatccaattaaaaaggatttggaatgtgaaaccgacaagttaaatcacttctac
acatttattctgcggcctgatgcttcttacagcgttctagttgataataaagagagggag
tttggtagtatgtacacagactgggacatccttcctccaaggaagataaaggtcaaaaat
gcaaagaagccagtggactgggatgacagagagtatattgatgaccctgaggatgtcaaa
cctgagggttatgatttgatcccacgcgaaattccagaccaaaaagctaaagagcctgag
gactgggatgaggaagaaaatggtcactgggaaccaccaaagatcccaaaccctgcctac
aaaggttcttggaaagcaaagaaaatcaagaacccggagtacaagggaaaatggaagaac
ccatggatagataatccagagtttgaagatgatccagatctttatgttctgaagcctata
agatatgcaggcattgaagtatggcaggtgaaggctggttcaatatttgacaatatattg
atcagtgatgacccggaatatgcaaggagcatggtggatgactattttgctcagcacaga
gagtctgagaaggagttatttgcggaagctgagaaagaaaaaaaagctagagaagatgag
gaagctaggatagcaagagaagaaggggaacgtagacgaaaagagaggggtgaccggtat
ggacacagggacaggaggcatcgttacaaacggcaccaccgacgtggttacatggacgat
taccatgatgagctataa
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