Brassica rapa (field mustard): 103843468
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Entry
103843468 CDS
T03449
Name
(RefSeq) tyrosine--tRNA ligase, chloroplastic/mitochondrial
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103843468
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
brp01007
]
103843468
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103843468
03029 Mitochondrial biogenesis [BR:
brp03029
]
103843468
Enzymes [BR:
brp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
103843468
Amino acid related enzymes [BR:
brp01007
]
Aminoacyl-tRNA synthetase
Class I (A)
103843468
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103843468
Prokaryotic type
103843468
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
103843468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4
TyrRSs_C
Motif
Other DBs
NCBI-GeneID:
103843468
NCBI-ProteinID:
XP_009118453
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All DBs
Position
A01:complement(29151007..29173820)
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AA seq
503 aa
AA seq
DB search
MAYTTGMTLASRSLIPICSKTFLSPLRVASLLSFPEKSSTTFFRRHQIHHLFSTSTTPLF
APVKCSTLETEVQAVSRPNVVDILQERGLLESVTSENLRSACSDPNVAPLKVYCGFDPTA
ESLHLGNLLGIIVLSWFQRCGHQAVGLIGGATGRVGDPSGKSLERPELDALTLEKNIAGI
KNILVKILGGNASSYVIFNNYDWWKDMIMLDFLKKVGRFARVGVMMAKESVKKRLESEQG
MSYTEFSYQLLQGYDFVHLFDKEGVNVQIGGSDQWGNITAGTDLIRKILQTEEAAYGLTF
PLLLKNDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDVDVIRFLKTLTFLSLDEIKI
VEDEMRRPGYVPNSAQMKLAEEVTRFVHGEEGLKEAIKATEALRPGAETKLDWNLIERIA
EDIPTCSLPIDRVSGVSIVDVSVSAGLFESKSAARRTLKQGGVYMNNQRVDDENKRVEEE
DIVEGKGLVLSSGKKNKVVIRIS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcatatacaacaggaatgacgcttgcttcaaggagtctcatccctatttgttcaaaa
accttcttatctcccttgcgtgtggcttctttactcagttttcctgagaaatcctccact
actttcttcagaaggcaccaaattcatcaccttttctccacgtctacaactcctctgttc
gcacctgttaagtgctcaactcttgagacagaagttcaagctgtttctcgccctaatgta
gtcgatatactccaagaaagaggactcctggagtcagtcaccagcgagaatctcaggtct
gcttgttctgatcccaacgtagctcctctaaaggtctactgcgggtttgatccaactgct
gagagtttacatttgggtaacctgcttggtatcattgtcctttcttggttccaaagatgt
gggcatcaagccgttggtttgatcggtggcgccactggacgggttggtgacccatctggt
aaaagcctagaaagacctgagcttgacgcccttacattggagaaaaacatcgccgggatt
aaaaacatcctcgtcaagattcttggtggcaatgctagctcttatgtgatttttaataac
tatgactggtggaaagatatgatcatgctggactttctgaaaaaggttggtcggtttgcg
agggttggagtaatgatggcgaaggagagtgtgaagaagagattggaatcagagcagggt
atgagctacaccgagttcagctatcagttactgcaaggctatgactttgttcacttgttt
gacaaggaaggggtcaatgttcagataggtgggagtgatcaatggggtaacataacagct
ggaactgatctgatacgtaagattctccagacggaagaagctgcttacggactaacgttt
cctctcctgctgaaaaacgatgggacgaagtttggaaaatctgaagatggagccatctgg
ctatctccttccatgctgtcaccttataagttctatcagtacttcttctctgttccagac
gttgatgtcatacgcttcttgaagacgttaactttcctgagtttggatgagataaagatt
gtggaagatgaaatgaggaggcctggttatgttcctaactcagcgcaaatgaaacttgct
gaagaagtaacaagattcgtacatggtgaagagggtttgaaggaagctataaaagcaaca
gaggctttgagaccaggagctgagacaaagcttgactggaacttgattgagagaattgca
gaggatataccaacttgctcactgcctattgatagagtctctggtgtttccattgttgat
gtatccgtttctgcggggttgtttgagagcaaatctgcagcgaggaggacgttgaagcaa
ggtggggtttatatgaacaatcagagagttgatgatgagaataagagagttgaagaagaa
gacattgttgaagggaaaggtcttgttctctcttcaggcaagaagaacaaagtggtcatc
agaatctcctaa
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