Brassica rapa (field mustard): 103843715
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Entry
103843715 CDS
T03449
Name
(RefSeq) peroxisome biogenesis protein 6
KO
K13339
peroxin-6
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103843715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103843715
Membrane trafficking [BR:
brp04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
103843715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
RuvB_N
Rad17
AAA_lid_3
AAA_18
AAA_17
AAA_22
nSTAND3
RNA_helicase
AAA_28
AAA_33
TIP49
AAA_14
AAA_7
DUF815
TsaE
Parvo_NS1
bpMoxR
AAA_3
Mg_chelatase
ATPase
AAA_11
AAA_25
IstB_IS21
AAA_2
Sigma54_activat
AAA_24
PhoH
SLFN-g3_helicase
Vps4_C
Motif
Other DBs
NCBI-GeneID:
103843715
NCBI-ProteinID:
XP_009118727
LinkDB
All DBs
Position
A09:44667632..44672110
Genome browser
AA seq
927 aa
AA seq
DB search
MVERRSPLVLSSTRATLRSVLNSFRPDEIPGRPDSIRRSVRLPAGVLRWKRDGVNDSKFD
SLDDSSLVGLSTQLLKRLSINSGSFVVINNIDIGIQRVAQVVVLDPPNKTLEDSSVTSLP
VSDSLHTMLVFPTFDTMSQQLLDQEVAYLSPMLAFNLSLHMSCLKSLVHRGNEVLEKYFV
AKFDEESASVAGESKIGLDLEPVSEVPGYASHLRVSFVKIPECGTIQSLVVSSSFEDEER
QGLIDSALNKYFGTDRVLSRGDVFRVCTEWNCGSSICVQCGQGLGSKEEDFIYFKVVAME
PSDERFLRVHHSQTALVLGGTVSCGLPPDLLVSSSKANMPLQVDTVNVLASVLSPPLCPS
ALSSKLRVAVLLHGLPGCGKRTVVNYVAKRLGLHVVEYSCHSLLASSEKKTSTALAQTFN
MARRYAPTILLLRHFEVFKNLGSQDGSQGDRVGVASEIASIIRELTEPVSNGEYSSMEEN
SNSNSSVDEGGKFRGHQVLLIASSESTEGLSPTIRRCFSHEIRMGSLNDEQRSELLSQSL
QDVSQLLNTSSDEFVKELVGQTSGFLPRDLRALVADAGANLFISKESETEKIDSLSGDVD
QSSQLGNGSERLKAKDDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKSSILDTV
QLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE
SEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSS
QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLY
LVAKKCPSTFTGADMYALCADAWFQAAKRKVLNSDSGDDSIPEDDPDSVVVEFIDFIKAM
DQLSPSLSITELKKYEALRDQFQGRSS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggttgagagacggagtcctctggtgctctcatccaccagagccacactccgttcagtc
ctgaattcgtttcgacccgacgagattccgggaagacccgattcgatacggcggagcgtt
aggttgccagctggcgtgctcagatggaaacgagacggagtaaatgattcaaagtttgat
tctttagatgactcttcactggtcggactctcgactcaattgctcaagagactatccatc
aactctggctctttcgttgttatcaacaacatcgacataggcattcaacgggttgcgcaa
gttgttgtacttgatcctcccaataagacgctggaagattcatctgtcactagcttacca
gtttcggactctcttcacacaatgcttgtctttcccacttttgatacgatgagtcaacag
ttactagaccaagaggttgcttacttgtctcctatgttagcttttaatcttagcttgcac
atgtcttgcctgaagtccctagtacatcgagggaacgaggtcttggagaagtactttgtt
gctaaattcgatgaagagtcggcgtcggtggcgggtgagtcaaagattggtttggatttg
gaacctgtgtccgaagttccagggtatgcgtcacatctaagggtttcttttgtaaagatc
ccggagtgtggtaccattcagtcattggtagttagttcctcgtttgaagatgaagagaga
caagggttgatagattccgcattgaacaagtattttggaactgatagagtactctcaaga
ggcgatgtgtttcgagtttgcactgagtggaactgtggttcaagcatttgtgttcaatgt
ggtcaagggttaggctccaaagaagaggactttatctatttcaaggttgttgcgatggaa
ccttctgatgagaggtttcttcgagtccatcactcacaaaccgctcttgtacttggtgga
acggtctcttgtggtcttccaccagatttgcttgtttctagttcaaaggctaatatgcct
ttgcaggtggacacagtaaatgtattggcgtcggtgctttccccacctctctgtccatca
gcactctcatcgaaactaagggttgctgttttactccatggcctgccagggtgcgggaag
agaactgttgtcaactatgtagctaagaggttgggcctgcatgtagttgaatatagctgc
cacagtttgttagcatcatccgaaaagaaaacatctactgctttggctcagacttttaat
atggcacgaaggtacgcaccaacgatactactgctccgccatttcgaagtttttaaaaat
ctgggatctcaggacggctcacagggtgatcgagttggcgtggcctctgagattgcttcg
attattagggaactgactgagccagtttctaatggtgaatacagttccatggaagaaaac
tcgaatagcaattcctctgtagatgaaggtgggaagtttaggggacaccaggtgctgtta
atcgcatcttccgaaagcactgaaggtctctctccaacaatcaggcgttgctttagccat
gagatacggatgggttctctaaatgacgagcagagatccgagttgctgtctcagtccctc
caagatgtttctcaactccttaataccagctcagatgaatttgtgaaagaattagttggt
cagacttctggtttcctccctcgggacttgcgtgctttagtcgctgatgctggtgccaac
ttattcatcagtaaagagtccgagactgagaagattgattctctatcaggtgatgtagac
cagtcaagtcaattaggtaacggcagtgagagattaaaagctaaggatgacttcactaaa
gctttggaccgatcaaagaagagaaatgcatcagcccttggtgctcctaaggttccgaat
gtgaaatgggatgatgttggtgggcttgaggatgtgaagagttcgatactggacacagtt
cagttacctctcctgcataaagatttattttcatctggactacgtaaacgttccggtgtg
cttctctatggtcctccaggaacagggaaaactttactggcaaaagctgtggctacagag
tgttccttaaacttcctcagcgttaaaggtccagagctgatcaacatgtacattggcgag
tcagagaaaaacgttcgagatatcttcgaaaaggcgagatcggcgcggccgtgtgtgatc
ttctttgatgagcttgactctcttgctccagcgcgaggcgcttctggtgattcaggagga
gtcatggaccgagtggtctctcagatgcttgcagagattgatggactgagcgattcttcg
caggatctgtttattataggagcgagcaacagacctgatttgattgatccagctcttctg
cgacctggaagattcgacaaacttctttatgttggagtcaatgctgatgcgtcttacaga
gaaagggtattaaaagcacttactcggaaatttaagttgagcgaagatgtgtcgctttat
ttagtagcgaagaagtgtccgtctacgttcacgggagctgatatgtatgcgttgtgtgct
gatgcttggtttcaggcagctaagcgaaaggtgttgaattcagattcaggggatgattct
attccagaagacgatccggactctgttgtagtagagtttatagattttataaaggcgatg
gatcagctttcaccatcactctccataactgaactgaagaagtatgaggcgcttcgagac
cagttccaaggccgttccagctga
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