KEGG   Brassica rapa (field mustard): 103843746
Entry
103843746         CDS       T03449                                 
Name
(RefSeq) PH-interacting protein isoform X2
  KO
K11797  PH-interacting protein
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103843746
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103843746
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML WDR55 Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C NBCH_WD40 Bromodomain Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_HPS5 Auxin_resp VPS8_N Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F WD_LRWD1 WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 103843746
NCBI-ProteinID: XP_009118759
LinkDB
Position
Unknown
AA seq 1548 aa
MDWIHKSSTPCLDSVPANAPPLQRQDRLLVCHSSPADVDMDLREVYFLILHFLSNGPCDR
TFGPLRDEILEKGLLPRRYHSSWSRSGTFTAPADVHDDAISLPLTYDNLVERYPHIEKDH
LVKLLKQLILNPPFPSHLRLEGHTLTAADVPTLLGSGSFSLVHHKITESQKASHVASYLR
WPHMHADQVRGLSLREIGGGFRKHHRAPSIISACHAIAKPSTMVQKMQNIKKLRGHRNAV
YCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASND
FVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLP
RIYVPNPLDAGTGKSNFPSSNAASTSNASKSHQILCCAYNANGTIFVTGSSDSNARVWSA
SKSNLDDAEQPTHELDVLRGHENDVNYVQFSGCAVAPRSSTTETLREDSYPKFKNSWFCH
DNIVTCSRDGSAIIWTPRSRKFHGKSGRWTKGYHLKVPPPPLPPQPPRGGPRQRLLPTPR
GVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSA
GYDGKTIIWDIWEGIPIKVYDIGRFKLVDGKFSQDGTSIVLSDEVGQIYFLNTGQGESQK
AAKYDQFFLGDYRPLIRDTNGHVLDQETQLLPHRRNLQDLLCDSSMIPYPEPDQTMFQQR
RLGALGVEWRPSSIKFSVGPDFSLGQDYIMPPLADLDRLIEPLPEFIDAMYWEPEHEVLS
DDNDSEYNAEVSSDGAKASPCSNSSNELECSSEDSDMENIYENSYNRKRRRQHPRADVAT
SSGRRDKRILDEIDSSEFGNKRIKNRRIGVTASKRRYSDVKESRPQRAAAQNARSLLSKI
SGSSSDEADDSSNSDSDRSASPLQQLEKPSQKLESLSNDKQKKRLIVKISVKKPTESVES
KRSVMSQADLEHVSSKSLEDNHKVIGIYSREAGSSSVDAKGASWCQDVPHSMNTPQREKA
NNQLIKSSDQDQTMCKWREETPLCESTKLAESENIVEAQTSNGDEDLSIVEPFCVQRRHC
DVDTSMEAEEIIPKKVRRLRLKLRHPSSPLKIEPDEVADDFGDGGEGLASTAPSSMNPVM
DSGPVRDNVRNSPAHNAEFGEATADVIRRKRSMRLKATSSQSSARNSVLRLRSIDKVKKQ
EIPSTSAYDGASLEEWPSTSRSRSASTSKQSLNTGIRLNNVARKVSWLMLSEHEQGCRYI
PQLGDEVVYFKQGHKEFLDSRELNDSDRSRYLPRNLGAVEFCKVEKLNYDTYPGSGESCC
KMTLRVLDSSSSHASRKEFQLTLPDLINFPDFIVEKTRYDAAMKTNWEVGDECRVWWRNE
SSEGGSWWEGRIEASQVKCPNFPDSPWERYKVVYETGDTNLHSPWEFDNPQFPWEISTMD
EEPREKLLSLFAGLVKSISKYQDSYGIQKLNEAAQKMDFCNRFPVPLYPELIHQRVENRY
YRSMGSFKHDVDAMLSNAESYFGTNAHMRSKIKRLRDKITKTLRKMMI
NT seq 4647 nt   +upstreamnt  +downstreamnt
atggattggattcacaaatcatctactccttgtttggattctgttccagcaaatgctcct
cctcttcagcgacaggataggcttcttgtctgccattcttcgccagccgatgtagatatg
gaccttagggaagtctatttccttatactgcattttctttctaacggcccctgtgatcga
acctttgggcctctgagagatgagattttggagaaggggcttttgccccgtagatatcac
tcctcctggtcaagaagtggcactttcactgcccctgctgacgttcatgatgatgccatc
tcgctccctttgacttatgataacttagttgagaggtatcctcatattgaaaaggatcac
ttggtgaagcttctcaaacaactcattttaaacccaccttttccttcacacctgagactt
gaaggacatactcttactgctgctgatgttcctacgctattgggatctggctccttttct
cttgtccatcataaaattacagagtctcagaaagctagccatgttgcatcatatttacgt
tggccgcatatgcatgccgatcaagtgcgtggcctaagtcttagagaaattggaggaggt
ttcagaaaacaccaccgtgctccgtctattatttcagcatgtcatgcaattgcaaaacca
tcaacaatggttcaaaagatgcaaaatataaagaagctcagaggacatcgtaatgccgtt
tactgcgctatatttgatcgttctggaagatatgttatcactggttccgatgaccggctt
gtcaaaatttggtcaatggaaactgcgctttgcttggctagctgccgcgggcatgaaggt
gacattacagacttggccgttagttcaaacaatgctttggtagcatcagcgtcaaacgat
tttgtgattcgagtttggaggttgcctgatggaatgccaatttctgtattgcggggacat
actggagctgttactgcgattgcattcagtcccagacaggcgtcggtttaccaactttta
tcgtcatcagatgatggaacctgtcggatctgggatgctaggtactctcagtggcttcct
cgaatctatgttccaaatccgttggatgctggcactggaaaaagcaattttccatcttct
aacgcggcatctacaagcaatgcatcaaagagtcatcaaatactatgttgtgcgtacaat
gctaatggaaccattttcgtcacgggtagctctgacagcaatgcgagggtttggagtgcc
tcaaaatctaacttggatgatgctgaacagccgactcatgaactggatgttctacgtggc
catgagaatgatgtaaactatgtgcagtttagtggctgtgctgtggctccaagatcatct
acaactgagactctgagggaagatagttacccaaagtttaagaattcctggttttgtcat
gacaacatagtaacctgctctcgtgatggtagtgcaattatttggacaccaagatcacgt
aaattccacgggaaatctggacgctggacgaaaggatatcatttgaaggttccacctcct
ccacttcctccacaacctcctcgaggagggccacgccagaggcttcttccaacaccacgg
ggtgtcaatatgattatatggagcctggataatcgtttcgtacttgccgctatcatggat
tgcaggatttgtgtttggaatgctgctgatggtagcttagtgcattgtttaacaggtcac
agtgaatcgtcctatgtcttggatgttcaccctttcaatccacggattgctatgagcgcc
ggctatgatgggaaaacaatcatctgggatatatgggagggtataccaatcaaagtatac
gatatcgggcgatttaagttggttgatggaaagttttcacaagatgggacatctattgtg
ctttcagatgaagttggccagatatattttctaaacacgggacaaggagagtctcaaaaa
gctgcaaaatacgaccagttcttccttggtgattaccgtcctcttattcgagataccaat
ggacatgttcttgatcaggagactcagcttcttccccatcggaggaaccttcaagatctt
ctttgtgattcaagtatgattccgtatccagaacctgaccagacaatgtttcagcaacgc
agactgggtgcattaggagtcgaatggcgtccttcctcgataaagttttctgttggccct
gattttagtctaggtcaagattatattatgcctcctttggcagatctggatagattgatc
gagccactgcctgagtttatagatgctatgtactgggaaccagaacatgaagttctgagt
gatgacaatgattcggagtacaatgctgaagtttcctctgatggagctaaggcaagccca
tgttccaactcttcaaatgaacttgagtgcagttccgaggacagtgacatggaaaatatt
tacgaaaatagttataatcggaaaagacgaagacaacatcctagagctgatgtggctact
tcatctggaaggcgtgataagaggattttggatgagattgatagctccgaatttggaaat
aagagaatcaaaaacagaagaattggcgtgacggcttcaaaaagaagatattctgatgtc
aaggaatcacgaccgcaaagagcagccgcgcaaaatgctcggtccttgctttcaaagatt
tctggaagctcttcggatgaagctgatgattcatccaatagtgactctgatagaagcgca
tcacctttgcaacagttggaaaagccatctcagaagctggaatctctttcaaatgacaaa
caaaagaaaagattgattgtaaagatctcggttaagaagccaacagagtctgtggaaagc
aagagaagtgtaatgagtcaagctgatttggagcatgtttcttcgaaatctttggaggat
aatcacaaagtaattggtatatactctagagaagctgggtcaagttctgtagatgcaaaa
ggtgcgtcatggtgtcaggatgtgccccattctatgaatacgccacagagagaaaaggca
aataatcaattgataaaatcttcagatcaggaccagactatgtgcaagtggagggaagag
actcctctttgtgaatccaccaaattagccgagtctgagaacattgtagaagcccaaaca
tctaatggggatgaagatttgtcaattgttgaaccattctgtgttcagcgaagacattgt
gatgtagatacttccatggaagccgaggagattattccaaagaaagttcgacgactgaga
ttaaagcttcggcaccccagcagtcctctaaaaatagagcctgatgaggtagcagatgat
tttggagatggtggagaaggtcttgcatccacagctccctcttccatgaatcctgttatg
gactctggacctgtgagagataatgttagaaactctcctgctcacaacgctgagtttgga
gaagctacagccgatgtgatacgtaggaagagatctatgagactgaaggccacttcaagt
cagtctagtgcaagaaacagtgtattacgtttgaggtctatagataaagtaaagaaacaa
gaaattccttccacaagcgcgtatgatggtgcatcacttgaagaatggccttctacttca
aggtcccggtctgcaagtaccagcaaacaaagtcttaataccgggataaggttgaataat
gtggcaaggaaagtctcatggttgatgttgtcagaacacgagcaaggctgccgttatata
ccccagcttggggatgaagttgtttacttcaagcagggtcataaagagttcctagacagt
agagaattaaatgacagcgaccgatcaaggtaccttcctcgaaacctaggagcggtagag
ttttgtaaagtcgagaaactcaactacgatacatatcctggttctggcgagagctgctgc
aaaatgactctcagggttctggattcttcttcgtcgcatgcctcccgcaaagagttccaa
ctaacactgcctgacctcattaattttccggattttattgtggagaagactcgatacgat
gctgcaatgaagacaaactgggaagtcggagatgaatgccgtgtgtggtggagaaacgaa
tccagtgaaggcggttcttggtgggaaggaaggatcgaggcttcacaggttaagtgccct
aacttcccagacagtccatgggagagatacaaagttgtctatgaaactggggacacgaat
ctccacagcccctgggagtttgacaatccccagtttccttgggaaatctctaccatggac
gaagagccaagagagaaactactttctttatttgctggactagtgaagtcaatcagcaag
tatcaggatagttatggaatccaaaagctaaacgaagctgctcaaaagatggatttctgc
aataggttcccagttcctttatacccagagctgattcaccagagagtagagaatcggtac
tacagaagtatggggtcgtttaagcacgacgtggatgcaatgctgtcaaacgctgaatct
tattttggtacaaacgcacatatgcgttctaagataaagcgactccgagataaaatcaca
aaaacgttgagaaagatgatgatatag

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