Brassica rapa (field mustard): 103844050
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Entry
103844050 CDS
T03449
Name
(RefSeq) protein EXPORTIN 1B
KO
K14290
exportin-1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03008
Ribosome biogenesis in eukaryotes
brp03013
Nucleocytoplasmic transport
brp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103844050
03008 Ribosome biogenesis in eukaryotes
103844050
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103844050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103844050
03009 Ribosome biogenesis [BR:
brp03009
]
103844050
03016 Transfer RNA biogenesis [BR:
brp03016
]
103844050
03036 Chromosome and associated proteins [BR:
brp03036
]
103844050
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103844050
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
103844050
Pre-60S particles
103844050
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
103844050
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103844050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Mesothelin
Motif
Other DBs
NCBI-GeneID:
103844050
NCBI-ProteinID:
XP_009119071
LinkDB
All DBs
Position
A01:complement(29043344..29050669)
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAEKLRDLSQPIDVTLLDATVESFYATGSKDERAAADNILRELKANPDTWLQVVHILQS
TRSTHTKYFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSGDEGSFRAERLYVNK
LNVILVQIVKHEWPAKWRSFIPDLVKAAKTSETLCENCMAILKLLSEEVFDFSKGEMTQQ
KIKEMKESLNSEFLLIHELCLYVLSASKRPELIRSTLSALHAYLSWIPLGYIFESPLLET
LLKFFPEPAYRNLTLQCLSEVAALNCGDFYNGQYVKMYGIFMGQLQAMLPLNINIPEAYS
NGSDEEQAFIQNLALFFTSFFKSHIKVLESAPEIISLLLVGLEYLISISYVDDTEVFKVC
LDYWNSLVSELFTLHHHVGHPGLTPSLFGLQMACLPRTAGSIKPEVTERQKLYADPLSKL
RGLMISRMAKPEEVIIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLGHDDTERQM
LSKLSKQLSGEEWAWNNLNTLCWAIGSISGSMDVDQENRFLVMVIRDLLSLCEIIKGKDN
KAVIASNIMYVVGQYSRFLRAHWKFLKTVVHKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVILQVGEKEPFVSELLSGLVTIVGDLEPHQIHTFYESVGSMIQAETDPQKRSEYIQR
LMDLPNQKWTEIIGQARQNADILKDPDMIRTVLNILQTNTRVATSLGTHFLSQISLIFLD
MLNVYRMYSELVSSNIAEGGPYASRTSVVKLLRSVKREILRLIETFLEKAEYQPHIGKQF
VPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKVNMQDEVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATFCFPALVQLSSEQLKLVMDSVIWAFRHTERNIAETGLNL
LLELLKKFQKSDFSNQFYRTYFMQIEQEIFAVLTDTFHKPGFKFHVLVLQHLFSLVESKS
LTEPLWDASTVLQQYPNNAAFVLEYTIKLLSSSFPNMTTSEVTQFVNGLYESRSDIARFK
NNIRDFLVQSKEFSAQDNKDLYAEEAAAQIERDIQKMLLIPGLIAPNEIQDDMADS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgagaagttacgcgacttgagtcagcctatcgacgtcaccttgctcgacgct
accgttgaatccttctacgcgacgggatcgaaggatgaaagagctgcggcggataatatt
cttcgggaattgaaagcgaaccctgacacctggcttcaagtggttcacattttgcaaagc
acgaggagtacacataccaagtactttgctcttcaggtgctggaaggtgttattaaatat
aggtggaatgctttacctgttgaacagcgtgatggaatgaagaattacatctctgaagtc
atcgtgcagctctcaggggatgaaggatctttcagagcggaaaggctttatgtcaacaag
ttaaatgtcattctggttcagatcgtgaaacatgagtggcctgcaaagtggaggagtttt
attcctgatctagttaaagctgccaaaactagcgagactttatgtgagaattgcatggct
attttgaagctcctgagcgaagaggtatttgatttctcaaaaggagagatgactcagcag
aagataaaggagatgaaagagtccctaaacagcgagtttctactcattcacgagttatgc
ctatatgttctctcagcttccaaaagaccagagcttattcgctcaacgctctctgcattg
catgcctatctttcttggattccgcttggctatatattcgagtcacccttgctggagacc
ctccttaaattcttccctgagccggcatataggaatctcacccttcaatgtctgtcagag
gttgcagctcttaattgtggggacttctacaatgggcaatatgtcaagatgtacggcatt
ttcatgggacagttgcaggcaatgcttcctttaaatatcaatatcccagaggcatattca
aatggaagtgacgaagaacaggcttttatccagaacttggcactgttcttcacttcattt
ttcaagtcgcatataaaagttctagaatctgcacccgagattatttctttactacttgtg
ggtctggaatatctcattagcatttcatatgttgatgacactgaagtattcaaggtttgt
ttggactactggaattcactagtttcggagttatttacgttacatcatcatgtcggccac
cctggtctaactccaagtctgtttggattgcaaatggcttgccttcctcgtacggctggt
agcatcaaaccggaagtcacagagcgacaaaaactttatgctgatccattatcaaaacta
agggggctcatgattagtcgtatggctaagcctgaagaagtgataattgttgaagatgaa
aatggaaatatagtccgtgaaactatgaaggataatgatgttcttgtccaatataagata
atgcgggagacattaatctatctctcgcaccttggtcatgatgataccgaaagacagatg
ttgagtaagctaagcaaacagttaagcggggaggaatgggcatggaacaatctgaacact
ttatgctgggctattggatctatttctggttccatggatgttgaccaagaaaacagattt
ctggtgatggttattcgtgatttgttaagtttatgtgaaatcatcaagggaaaagacaat
aaagctgttattgcaagcaacatcatgtatgttgttggacagtactcgaggttcttaagg
gctcactggaagtttctgaaaacagttgttcataagttgtttgaattcatgcatgagaca
catcctggtgttcaggacatggcgtgtgatacattcttgaaaattgttcaaaaatgcaag
cgcaaattcgttattcttcaggttggagagaaggagccatttgtatctgaacttttgtca
ggacttgttactattgttggagatcttgaacctcatcagattcacaccttttatgaatct
gttggtagtatgatccaggcagaaacagatcctcagaagaggagtgaatatatccagagg
ttgatggatctccctaatcagaaatggacagaaattataggacaagcacgtcagaatgca
gatatcctcaaagacccagatatgatacgtactgtacttaatatcctccagacaaatacg
agagttgcaacttcactaggaacacatttcttatctcaaatctcgttgatcttcttggat
atgctgaatgtttatagaatgtacagtgaactcgtgtcgagcaacattgctgagggtggc
ccgtatgcttcgaggacatctgttgttaaacttctaagatctgttaagagagaaatcctt
aggttgatagaaacgtttctagagaaagcggaataccagccacacattggcaaacagttt
gttccaccaatgatggatccagttcttggtgactatgcaagaaacgttcccgacgcaagg
gaatcagaagtcttatcactctttgcgacaataataaacaagtacaaggttaatatgcaa
gatgaagtgccccgcatttttgaagctgttttccagtgcactttggagatgatcacgaag
aatttcgaagattatccagagcaccgcctcaagtttttctcgttacttcgtgctattgcg
acgttctgtttccctgccttggtacagttgtcaagtgagcaactgaagctagtgatggat
tcagttatctgggcgtttaggcataccgaaagaaacatcgcagaaacagggcttaatctc
ttgctggagctgctgaaaaagtttcagaaatctgacttctctaaccaattctaccggaca
tacttcatgcaaattgagcaagagatatttgctgtcttgaccgataccttccacaagcct
gggttcaagtttcatgtcttggtgctacagcatctattttccctggttgagagcaagtct
ttgacggaacctttgtgggatgcttcaacggtgcttcagcaatacccaaacaatgctgcc
tttgttcttgaatacaccatcaagcttctaagctcatcattcccaaacatgactacatca
gaggtgacgcaatttgtgaatggactttacgagtcgagaagtgacattgcgagattcaag
aataacatacgagacttccttgtacagtccaaggaattctctgctcaggataacaaagat
ctatatgctgaagaagctgctgctcaaattgagagagatatacaaaagatgcttttgatt
cctggtcttattgctccaaacgagattcaagacgacatggctgattcataa
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