Brassica rapa (field mustard): 103844304
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Entry
103844304 CDS
T03449
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A
KO
K12819
pre-mRNA-processing factor SLU7
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103844304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103844304
Spliceosome [BR:
brp03041
]
Complex C
Other components
Step II factors
103844304
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
103844304
NCBI-ProteinID:
XP_009119352
UniProt:
M4DFK3
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Position
A10:complement(1267754..1270684)
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AA seq
535 aa
AA seq
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MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKP
SLKHQRKWKSDPNYTKSWYDRGAKIYQAEKYRKGACQNCGAMTHTAKACMDRPRKIGAKY
TNKNIAPDEKIESFELDYDGKRDRWNGYDPSTYHRVVDLYEAKEDARKKYLKEQQIKKLE
EKNNNQEGDDATSDGDEEDDDLRVDEAKVDESRQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDINSAHYDPKTRSMREDPLPDADPNDKFYLGDNQYRNSGQALEFKQMNI
HSWEAFDKGQDMHMQAAPSQAELLYKNFKVAKDKLKTHTKDTIMEKYGNASTEDEIPMEL
LLGQSERQVEYDRAGRIIKGQEVILPKSKYEEDVLANNHTTVWGSWWRDHQWGYRCCQQT
IRNSYCTGSAGIEAAEASLDLMKANIARKEACEESPKKVEEKKMAAWGTDVPEDLELNEE
ALANALKKEDERKREEKDERKRKYNVKYTNDVTPEEMEAYRMKRVHHEDPMKDFM
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcttcagttgcttttaagtctagggaagaccataggaagcaaatagagtta
gaggaggctcgtaaagccgggcttgcaccagccgaggtagatgaggatggaaaggagatc
aatcctcacattcctcagtatatgtcctctgctccatggtatctcaactccgagaagccg
agtttgaagcatcaaaggaagtggaagagtgatcccaattacacaaagtcttggtacgac
agaggtgcaaagatctaccaagctgaaaagtaccgcaagggagcatgtcaaaactgtggt
gcaatgacgcatactgcgaaggcgtgtatggataggcctcgcaagattggagcgaagtac
acgaacaagaacattgcgcctgatgaaaagatcgagagttttgagcttgattatgatggc
aagagggacaggtggaatgggtacgacccttcaacctaccatcgtgtggtagacctttat
gaagcaaaagaggatgcgcggaagaagtatctcaaggagcagcagattaagaagctagag
gagaagaacaataaccaggaaggcgatgatgcaaccagtgatggagacgaagaagatgat
gacttgagggtcgatgaagctaaggttgatgagagcaggcagatggactttgcaaaggtt
gagaaacgtgttcggacaactggtggtggtagtacaggaactgtaaggaatctgcgtatc
agagaagacacagcgaaatacctgttgaaccttgatatcaattcggctcattatgatcct
aaaactcgatccatgcgtgaagacccgcttccagatgcagatccgaatgataaattttat
ttgggagataatcaatatagaaacagtggccaagctttggagttcaaacagatgaacatc
cactcttgggaagcgtttgacaagggacaggacatgcatatgcaagctgctccatcccaa
gctgagctgctctacaagaatttcaaggttgcaaaagacaaactgaagactcatacgaag
gacacaatcatggagaagtacgggaacgcttctacagaagatgaaattccaatggagctt
ttgcttggacagagcgaaagacaagttgagtatgaccgagcagggaggattataaaggga
caggaggttatactgccaaagagcaaatacgaggaagatgttctcgctaacaatcatact
actgtttggggctcgtggtggagagaccatcaatggggatatagatgttgccagcagacg
attcgcaatagttactgcacaggctctgctggtattgaggctgcagaggcttcccttgat
ctgatgaaggctaatattgctcgcaaagaagcctgtgaagagagcccaaagaaggttgaa
gagaagaagatggccgcatggggaaccgatgttcctgaagatttggaattgaacgaggag
gcacttgctaatgctcttaaaaaggaggatgagcgtaagagggaggaaaaggatgagaga
aagcgcaagtacaatgtcaaatacaccaacgatgtgactccggaagagatggaagcttac
agaatgaagagagttcaccacgaggacccaatgaaggatttcatgtga
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