Brassica rapa (field mustard): 103844523
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Entry
103844523 CDS
T03449
Name
(RefSeq) transcription initiation factor IIE subunit alpha
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103844523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103844523
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
103844523
Prokaryotic type
Archaeal type
TFE
103844523
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
MarR
DUF6396
SSRP1_C
wHTH-PRTase_assc
Zn_ribbon_8
DZR
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
103844523
NCBI-ProteinID:
XP_009119564
LinkDB
All DBs
Position
A10:927937..931331
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AA seq
477 aa
AA seq
DB search
MDSKGPVQKTVVLEPFIKLVRLLARAFYDDYTTKSDNQQKTARSDNRGIAVVVLDELTRK
QWVREEDLAKELKLHAKQLRKIIRHFEEQNLIMRDHRKETAKGAKMYSVAVAATTGGRAE
DKVKFHTHSYCCLNYPQIYDIVRYKLHRMKKKLKDELEDKNTVQEYGCPNCQRKYNALDA
LRLISMEDDAFHCENCNGELVVECNKLTSEEVADGDDNARRRRREKLRDMLQKMEVQIKP
LMDQINRVKDLPVPDFGSLIAWEARAAIAARENGELNPNDPLRSQGGYGSTPMPFLGETK
VEVNLGEGKEDVTSNGGDSSLKVLPPWMIKQGMNLTEEQRGEMRHEAKVDVGSSKLSDDK
KSAMESGDAKDLLKDEYFKAYYAALIQQQQELAQKQRQEESGGEVVAPDSELASTSSDRQ
VGMKSKRKEEEDEWEEEVAPVPVAGNGNYKVDLNVEAAEASGGEEEEEEEDIDWEEG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatagtaagggcccggtgcagaaaacagtcgtgctcgagccgtttatcaagttggtg
aggcttttagcaagggctttctatgatgattataccaccaaaagcgacaatcagcagaaa
actgcaagaagtgacaacagagggattgccgttgtggtgctcgatgagcttaccaggaag
caatgggttagagaagaggacttggctaaagagttgaagttgcacgccaagcagcttaga
aaaataatacgacactttgaagaacagaacttgatcatgcgtgaccacaggaaagagact
gcaaaaggtgcgaagatgtatagtgttgcagtagctgctacaactggtggccgagcagag
gacaaggttaagttccatacccactcgtattgctgcctcaattatccacagatatatgat
attgttcgctataaactgcaccggatgaaaaagaagctcaaagatgaactagaagataag
aatactgttcaggagtatggctgtcctaactgccaaagaaaatataatgcattggatgcc
ttgagattaatttctatggaagacgatgctttccactgtgaaaactgcaatggtgagctg
gttgtggaatgtaacaagctaacttcagaagaagtagcagacggagatgataatgcaagg
agacggcggcgggaaaaactaagggatatgcttcagaagatggaggttcaaataaaacct
ctgatggatcaaataaacagagtaaaagacctgccagttcccgactttggatctcttatc
gcatgggaggctcgtgcagctattgctgctcgtgaaaatggcgagcttaaccctaatgat
cctttgaggtcacagggtgggtatggttcaacaccaatgccatttctcggagagacgaag
gttgaggttaaccttggtgagggaaaagaggatgtcacgtccaacggtggagattctagt
ctgaaagtgttgcctccatggatgataaagcaaggaatgaatctgacggaggaacaaaga
ggagagatgaggcatgaagcaaaggttgatgttggctcatcgaaactttcagatgacaag
aagtcagccatggaaagtggcgatgctaaagatttgttgaaggatgagtatttcaaagct
tactacgctgctctgatacagcagcagcaagagctagcacagaagcagagacaagaagaa
tctggaggcgaagtagtagcccctgacagtgagttggcttcgacatcctcagatcgtcag
gttggtatgaagtccaaacgcaaagaggaagaagatgaatgggaagaagaagtggctcca
gttccagttgcaggaaatggaaactacaaggtggacttgaatgtggaagcagcagaggct
tcaggtggtgaagaagaagaggaagaagaagacatcgactgggaagaaggctga
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integrated database retrieval system
