Brassica rapa (field mustard): 103844563
Help
Entry
103844563 CDS
T03449
Name
(RefSeq) exopolygalacturonase clone GBGE184
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00040
Pentose and glucuronate interconversions
brp01100
Metabolic pathways
Module
brp_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103844563
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103844563
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
103844563
NCBI-ProteinID:
XP_009119612
UniProt:
A0A3P6DBY6
A0A8D9MEC4
LinkDB
All DBs
Position
A10:complement(761185..762995)
Genome browser
AA seq
420 aa
AA seq
DB search
MANARMLAAKANNTNIGSFIIMALVLGSCVANGEYLGGGRELTGNPTVFDITQFGAVGDG
RTNTFKAFLKAWIQVCASPVPATLLVPKGNFLAGPIIFAGPCKSKVTVNVQGTISATTSG
FATPEWILFERVDNVHLTGPGIIHGRGEAIWGADGCGKKFKCNLPPTSLKFRNIVNLEVS
GISSVNAKAFHMFLVKTVNVNIHNIKIIAPAESPNTDGIHLSNADNVRILDSFIGTGDDC
VSVGRGSNNVTVERVVCGPGHGLSVGSLGKYPNEEDVSGIHFKNCTMRNTDNGLRIKSWG
GSTPSKAVDIHFEDIIMENVKNPIIIDQNYGSRGGESRVAISDVLFKGVKGTTITKDFVQ
FMCSKSVPCKGVVVDDVNLNFVGHKGGHPSASGGLIGSLCNNAGVVFGGRVNFPLCPNRK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgcaagaatgttagccgctaaggcaaataacactaatattggttcattcatt
ataatggccttggtacttggttcttgcgtggctaacggtgaatatcttggaggcggccgt
gaacttactggcaaccctaccgtatttgatataactcagtttggagcagtgggagatggt
cgcaccaatactttcaaggcgtttttgaaagcatggatccaagtgtgtgcaagtcctgta
ccagcaacactactagtccctaaaggaaatttcttggctggtccaattattttcgccggt
ccatgcaaaagcaaagtgaccgtcaatgttcaaggcacgatcagtgctacaacaagcgga
ttcgcaacccctgaatggatcttattcgagcgtgtcgacaatgtccacctcaccggacct
ggcataattcacggcagaggtgaagcaatatggggagcagatggttgtggcaaaaagttt
aaatgcaatctccccccaacgtctctaaaattcagaaacatagtaaatcttgaagtcagc
ggcattagctcggtcaacgcaaaggccttccacatgttcttggtgaaaaccgtgaatgtc
aacatccacaacattaagattatcgcccctgctgaaagtcccaacacggatggtatccat
ttgagcaatgccgacaacgttaggatcctagacagttttatagggaccggagacgattgt
gtttcagtcggtcgtggttccaacaatgtaaccgtcgaacgtgtggtttgtggtcctgga
cacggcctcagtgttggtagtcttggtaagtaccccaacgaggaggacgttagcggcatt
cactttaagaactgcacaatgagaaataccgacaatggtcttagaatcaagagttggggt
ggttcgacaccaagcaaggctgtggacattcattttgaagatattatcatggaaaacgtc
aagaacccaatcatcattgaccaaaactatggttcaagaggcggggagtcaagagttgcc
ataagcgatgtgttgttcaagggtgtaaaaggaacaacaattacaaaagattttgttcag
ttcatgtgcagcaaatcggtaccgtgtaaaggagtcgtagtcgacgatgttaacttaaac
ttcgtaggccacaaaggaggacatccatcggcgtcaggtggtttgatcggatctctttgt
aataacgccggtgttgtatttggtggaagggttaacttccctctgtgcccaaatcgaaaa
taa
DBGET
integrated database retrieval system
