KEGG   Brassica rapa (field mustard): 103844695
Entry
103844695         CDS       T03449                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03013  Nucleocytoplasmic transport
brp03015  mRNA surveillance pathway
brp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103844695
  09122 Translation
   03013 Nucleocytoplasmic transport
    103844695
   03015 mRNA surveillance pathway
    103844695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103844695
   03041 Spliceosome [BR:brp03041]
    103844695
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103844695
Spliceosome [BR:brp03041]
 Complex C
  Other components
   EJC/TREX
    103844695
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 103844695
NCBI-ProteinID: XP_009119756
UniProt: A0A3P6D1W1
LinkDB
Position
A10:16159..17261
AA seq 148 aa
MEEENEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLK
ECKRIVSESEIMKEDDFKWPEPDRVGRQELEIVMGNEHISFATSKIGSLVDVQSSDDPEG
LRIFYYLVQDLKCLVFSLISLHFKIKPI
NT seq 447 nt   +upstreamnt  +downstreamnt
atggaagaagaaaacgagttctacctgcggtactatgtcgggcacaaggggaaatttgga
cacgagttcctggagttcgagtttagaccggacggtaagctccgatacgccaataactca
aactacaagaacgatacgatgatccggaaggaggtgtttctcacccccgccgttctcaag
gaatgcaagcgtatcgtctccgagagcgagataatgaaagaagatgattttaagtggccg
gaacctgaccgtgttggaaggcaagagcttgagatcgttatgggaaatgagcatatctcc
ttcgctacttctaagattggttctctcgttgatgtccagagcagtgatgatcctgaaggt
cttcgcatcttttactatcttgttcaggacttgaaatgtcttgttttttcgctcatctct
ctgcacttcaagatcaagcctatttag

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