Brassica rapa (field mustard): 103845072
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Entry
103845072 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103845072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103845072
Membrane trafficking [BR:
brp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103845072
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_11
TPR_17
TPR_CcmH_CycH
TPR_8
TPR_14
TPR_19
CFAP70_TPR_C
TPR_9
TPR_7
TPR_12
RMD1-3
CFAP70_mid_TPR
PPTA
TPR_20
CABIN1_N
TPR_10
ARM_TT21_5th
NGF
PEX18_PEX21_C
Motif
Other DBs
NCBI-GeneID:
103845072
NCBI-ProteinID:
XP_009120148
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Position
A10
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AA seq
726 aa
AA seq
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MAMRDLVNGGAACAVPGSSSSSNPLGALTNALLGSSSKTQERLKEIPNATRSGPGPQFYS
QDQHLSSLPGSELDQPVLQPGAQGAEFFRGFSSVDQNGLGAAWDEVQRGGPMPPMGPLYE
PVHPTFEGPPQRVLSNFLHSFVESSRGGIPFRPPPVPVLGLSQSDKQCIRDRSSIMARHF
FADRGEEFINSQVNALLSSLEIDDGIQARGHIPGRFRELDNFWNESQAVTKPGLHPADGW
AAEFNQHGMDHGGPDGWVQSFEQQHGVNGWATEFEQGQSQLMSNQMRSMDMQNLAAMEQT
RKLAHTLSQDGNPKFQNSKFLQFVSKMSRGELIIDENQVKPGSAPGEWATEYEQQYLGPP
SWADQFANEKLSHGPEQWADEFASGRGQQESAEDQWVNEFSKLNVDDWVDEFAEGPLGES
SADAWANAYDEFLTERNAEKQASGVYVFSDMNPYVGHPDPMKEGQELFRKGLLSEAALAL
EAEVMKNPENAEGWRLLGVTHAENDDDQQAIAAMMRAHEADPSNLEVLLALGVSHTNELE
QATALKYLYGWLRRXYGAIAPPELADSLYHADIARLFTEASQMNPEDADVHIVLGVLFNL
SREFDRAMTSFQTALQLKPNDYSLWNKLGATQANSVQSADAISAYQQALDLKPNYVRAWA
NMGISYANQGLYQESIPYYVRALSMNPKADNAWQYLRISLSCASRQDMIEACESRNLDLL
QKEFPL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgagaccttgtcaacggcggagccgcctgcgctgttcccggctcctcttct
tcttccaaccctctcggagctctcaccaacgcgcttcttggttcctcttccaaaacccag
gaaaggctgaaggagatacctaatgccacccgctcaggtcctgggccacagttttactct
caagaccaacacctaagctcacttcctggttctgagttagatcagcctgttctgcaacct
ggtgctcagggggcagagttcttccgtggctttagctctgtagatcagaatggtctcggt
gcagcttgggatgaagtacagcgtggtggacctatgcctccaatgggacctttgtatgag
ccagtccatcctacatttgagggacccccacaaagagtcttgtcaaactttctgcactca
tttgttgagagtagccgtggtggcattccttttcgtccaccacctgtccctgtgttggga
ttgtcgcaaagtgacaaacaatgcatacgtgatcgtagtagcattatggcccggcatttt
tttgccgataggggagaggaattcatcaattctcaggtaaatgcattattgtcatctttg
gaaattgatgatggcattcaagctagaggtcatattcctgggagatttcgagagctagat
aatttttggaatgagtctcaagctgtcacgaaacctggtttgcatcctgcggatggttgg
gcggccgaatttaaccagcatggaatggatcatggtggtcctgacggatgggtccagtct
tttgagcaacaacatggtgtgaatgggtgggccaccgagtttgagcagggtcaatctcaa
ttgatgtcaaaccagatgagaagtatggatatgcaaaatttagctgcaatggagcagact
cgtaagcttgcccatacactctctcaggatggcaatcctaaatttcagaattcaaaattc
ctccagtttgtttcaaagatgagccgcggtgagctcatcattgatgagaatcaggtcaaa
ccaggatcagcccctggggaatgggctactgaatatgaacagcagtatttggggccgcca
agttgggctgatcagtttgcaaatgagaaactttcgcatggaccagagcagtgggctgat
gagtttgcttccgggagaggacagcaagaatcggcagaggaccaatgggttaatgagttt
tcgaagttgaatgttgatgactgggttgatgaatttgctgaagggcccctgggtgagagc
tcagctgatgcatgggcaaatgcttatgatgagtttctgactgaaagaaatgctgaaaaa
caagcgagtggtgtctacgtcttctctgacatgaatccttacgtgggccaccctgatcct
atgaaagaagggcaggaattgtttcgcaaaggactcctgagtgaagcagcgcttgcactg
gaagctgaggttatgaaaaatcctgagaatgcggaaggttggagattacttggggtcacg
cacgcagagaacgatgatgatcaacaggcaatagctgcaatgatgcgggcacatgaggcc
gatccctcaaatctagaggtgcttcttgcgcttggtgtgagccataccaatgagttggag
caagcaactgctttgaaatatttatacggatggctgcggaggnggtatggagcaatcgcg
cctccagagcttgctgattccctataccatgctgatattgctagattattcactgaagct
tctcagatgaaccctgaggacgctgatgtgcatatagtgttgggtgttctcttcaatctg
tcaagggaattcgatagagctatgacttccttccaaacagcgttacaattaaaaccaaac
gattattcgctttggaataagcttggagctacacaagccaatagtgtccagagtgccgat
gccatatctgcttatcaacaggctctagatttaaaacctaactacgttcgtgcttgggca
aacatgggaatcagttacgcaaaccaggggttgtaccaagaatcaatcccttattatgtg
cgtgccctctcgatgaatcctaaagccgataacgcatggcaatacttgaggatctcgtta
agttgtgcctcgaggcaagacatgattgaagcttgtgagtcaaggaatctcgatctcttg
cagaaagaattcccgctgtga
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