Brassica rapa (field mustard): 103845100
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Entry
103845100 CDS
T03449
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103845100
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
brp01007
]
103845100
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103845100
Enzymes [BR:
brp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
103845100
Amino acid related enzymes [BR:
brp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
103845100
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103845100
Prokaryotic type
103845100
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
103845100
NCBI-ProteinID:
XP_009120180
UniProt:
M4CF17
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All DBs
Position
A10:11685180..11687842
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AA seq
575 aa
AA seq
DB search
MGGDIPPPVDQLAAVSLTSDEASSSTVQKARFSDRVRIQSILGRPDGGAGLAGQKVRISG
WVKTGREQGKGAFAFLEVNDGSCPANLQVMVDASVSDLSKLIATGTCVTVDGCLKLPPEG
KGTKQKIELSVVEVVDVGTVDPGTYPIPKTKLTLERLREFLHLRARTNSISAIARIRHAL
AIATHTFFDEEGFLYVQTPIITTSDCEGAGEMFQVTTLISTTEKLERELIENPPPTEADV
EAARVVVKERGEAVAELKAAKASKEAILASVAELNDAKANLAATEARSRLKPGLPKVDGK
IDYSQDFFGRQAFLTVSGQLQVETYACGLSDVYTFGPTFRAENSHTSRHLAEFWMVEPEL
AFADLEDDMNCAEAYVKYMCKWLLEKRYDDMELMAKNFDKGCIDRLKLVASTPFGRLTYT
EAIKILEEAVAKGKKFDNDVEWGIDLASEHERYLTEVVFQKPLIVYNYPKGIKAFYMRLN
DDGKTVAAMDVLVPKVGELIGGSQREERIDVIMERLEEIGLPVEPYEWYLDLRRYGTAKH
SGFGLGFERMVLFATGMDNIRDVIPFPRYPGRADL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagacattccgccgccggtagatcaactagccgccgtctcactaaccagcgac
gaagcctcctcttcaacggtgcagaaagcacggttttccgatcgggtccgcatccaatcg
atcttgggccgacccgacggaggagccggactcgcgggtcagaaggtccgaatcagcggg
tgggtcaaaaccgggagggagcaagggaaaggggctttcgctttcctcgaggtgaacgat
gggtcgtgcccggcgaacctccaggttatggtggacgcttccgtatcggatctctcaaag
ctgatcgcgacggggacttgcgtgaccgtcgatgggtgtttgaagcttcctccggaaggt
aaaggaacgaagcagaagattgagcttagcgttgtggaggtggttgatgtggggactgtg
gatccgggtacgtacccgattcctaagacgaagcttactcttgagaggctgagagagttt
cttcatcttcgtgcaagaaccaactcgatctcagctattgcaagaatccgtcacgcgctt
gctattgctacacacaccttctttgatgaagaaggtttcctttacgttcagactccgatc
atcaccactagtgactgcgaaggagctggtgagatgttccaagtgacgacgttgatcagt
acaactgagaagcttgagagagaactcattgagaaccctcctcctacggaggccgacgtt
gaagctgcgagggtcgttgtcaaggagagaggcgaagctgtggcggagctcaaagctgct
aaagcgagcaaggaagcgatcctcgcttccgttgctgagctcaatgatgcgaaggcgaat
ttagccgcgactgaagcgaggtcaaggctcaagcctggtttgcctaaagtcgatgggaag
attgattactcgcaagatttcttcggtcgccaagctttcttgacagtctctggtcaattg
caagtggagacttatgcttgtggtcttagcgatgtgtacacgtttggtcccactttcagg
gcggagaactctcacacctcaaggcatctcgctgagttctggatggttgagcctgagtta
gcctttgctgatcttgaggacgatatgaactgcgcagaagcatatgtgaaatacatgtgc
aagtggctgcttgagaaacgttatgatgatatggaactcatggctaagaacttcgacaag
ggatgcattgacaggctaaagcttgttgcctcgactccctttggtcgtctaacgtacacg
gaagcgataaagatacttgaggaagctgtggctaaaggaaagaagtttgataacgatgtg
gaatggggtatcgacttagcatctgagcacgaaagatacttgacagaggttgtgtttcag
aagcctcttattgtgtacaactacccgaaaggaatcaaagctttctacatgagacttaac
gacgatggaaagacagttgctgccatggatgtcctcgttccaaaggtcggagaactcatt
ggtggaagccaaagggaagaacgtattgacgtcatcatggaaaggcttgaggagattggt
ctaccagtagagccatacgagtggtacttggacttgcgacgttacggaacagcgaagcat
tcagggtttggacttgggttcgagcgtatggttctgtttgctacggggatggacaacatc
agagacgttattcccttccctcgctatcctggaagagctgatctttga
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