Brassica rapa (field mustard): 103845554
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Entry
103845554 CDS
T03449
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103845554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brp03036
]
103845554
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
brp03037
]
103845554
Enzymes [BR:
brp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103845554
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
103845554
Chromatin remodeling factors
SRCAP complex
103845554
INO80 complex
103845554
INO80 complex (yeast)
103845554
SWR1 complex
103845554
ASTRA complex
103845554
Cilium and associated proteins [BR:
brp03037
]
Motile cilia and associated proteins
Dynein assembly factors
103845554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_19
AAA_5
AAA_16
AAA_18
Mg_chelatase
bpMoxR
AAA_25
Cdc6_lid
TsaE
GvpD_P-loop
DnaB_C
AAA_7
nSTAND3
Zeta_toxin
AAA_11
AAA_28
NPHP3_N
IstB_IS21
Rad17
Motif
Other DBs
NCBI-GeneID:
103845554
NCBI-ProteinID:
XP_009120666
UniProt:
A0A397XKL8
M4CDX5
LinkDB
All DBs
Position
A10:14057667..14060831
Genome browser
AA seq
458 aa
AA seq
DB search
MEKVKIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIPLAAGFVGQLEAREAAGLVVDMIK
QKKMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKETKDVYEGEVTELSPEETESLTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLQDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGVCNVRGTDMPSPHGVPIDLLDRL
VIIRTQIYNPSEMIQIIAIRAQVEELTVDEECLVLLGDIGQRTSLRHAVQLLSPASIVAK
MNGRDNICKADIEEVTSLYLDAKSSAKLLHEQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtaaagatcgaagagattcagtccaccgctaagaaacagcggattgctact
cacactcacatcaagggtcttggcctcgagccaaccggaatccctataccattggcggct
ggatttgtcggtcagcttgaggcaagagaggcagctggtcttgtagtggacatgatcaag
cagaagaaaatggctggcaaggctcttctgctcgctggacctccggggacagggaaaaca
gcattggctcttggaatatcccaagagctgggtagtaaggttcccttctgtccaatggtt
ggatctgaggtttactcatcggaggttaagaagactgaggttctcatggagaattttagg
cgtgccattgggttacgtatcaaggaaaccaaagacgtctacgaaggagaggttacggag
ctgtccccagaagaaactgaaagtcttaccggaggttacggcaaaagcatcagtcatgtt
atcattggactcaagacagtcaaaggaaccaaacaacttaagttggatcccactatctac
gatgccttgatcaaggagaaggtagctgtaggagatgttatatacattgaagcaaacagt
ggagctgtaaagcgggtgggtaggagtgatgcttttgccactgagttcgatctggaagca
gaagaatatgttccacttcccaaaggagaggttcacaaaaagaaagagatagtgcaggat
gtgacgcttcaagatctggacgcagcaaatgctcgacctcaaggcgggcaggatatactt
tctttgatgggccaaatgatgaaaccccggaagactgagatcactgataagctgcgccaa
gaaattaacaaggtggtgaaccgttacatagatgaaggtgttgcagagcttgttcccgga
gttctatttatcgatgaggttcatatgcttgatatggagtgtttttcttacttaaaccgt
gctcttgagagctcgttatctccgatagtgatattcgcaacaaatagaggagtttgcaac
gtaagagggactgatatgccgagtccccatggagtccctattgacttgttagatcggttg
gtcattatcaggacccagatctataacccctctgaaatgatacagattatagctatccgt
gcgcaagtagaagagctaacagtggatgaagaatgcttggtcctacttggggacattggg
caaagaacatccttaaggcacgcggttcagcttctgtctcctgccagtatcgtggcgaaa
atgaatggacgtgataatatttgcaaggctgatatagaggaagtaacatcactctacctt
gacgccaaatcttcagcaaagcttttgcacgagcagcaagagaaatacatctcatga
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