Brassica rapa (field mustard): 103845605
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Entry
103845605 CDS
T03449
Name
(RefSeq) protein argonaute 9 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103845605
03036 Chromosome and associated proteins [BR:
brp03036
]
103845605
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103845605
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103845605
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
103845605
microRNA pathway
RISC loading complex
103845605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
103845605
NCBI-ProteinID:
XP_033138519
LinkDB
All DBs
Position
A10:complement(14323568..14329696)
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AA seq
936 aa
AA seq
DB search
MGCDKGKGLPPPPPVVPSNLVPELEPIKKNTLLPMARRGSGTKGVKTHLLTNHFRVNFNN
SNGHFFHYSVAITYEDGRPVEAKGIGRKILEKVQETYRTDLGSKYFAYDGEKTLFTVGAL
PSNKLDFSVVLEDTSSSRNNTGNASPNESNDADRKRSRRPNRSKKFMVEISYAARIPMQA
IASALQGKETDYLQDAIRVLDVILRQSAARQGCLLVRQSFFHNDVQNFVHIGGGVTGVRG
FHSSFRTTQGGLSLNIDTSTTMVVQPGHVVDFLLVNQNVKDPKYLDWNKARRALKNLRVQ
VAPSNREYKITGLSEERCQDQMFTRNSKNEKGEVEEVQTTVYKYFTEFRGIPLRYSGDFP
CINVGKPKRPTFIPIEHCELVSLQRYTKSLNSLQRASLVEKSRQRPPERMASLTNVGLLS
IILETEYFLFNFGFMLFILKGLKKSNYNADLVLQESGVSIGSSFTQVEGRVLPAPRLKVG
NGEEFQPRDGRWNFNYKKLVEPVTVTKWAVVNFSARCDTNRLISDLIRCGRMKGINVEAP
YKVVFQEDPNYRGAPANIRVEKMFEQMQSELRKGKEGRPKFILCILAEKKNSLVYGPWKR
RNLVEEGIVTQCIAPTPKINDQYLTNVLLKINAKLGGLNSLLAMERSRAMMPLVTQVPTF
IVGMDVSHGSPGQSDIPSFAAVVGSIEWPLISKYRACVRTQSRKVEMIDNLFKPATNEKG
EPVDDGIFSELLWDFYLSSKKRKPEHIIIFRDGVSESQFNQVLNIELDQMMQACKFVEEN
WEPKFTVIIAQKNHHTKFFQAEGPGNVPPGTIIDSKICHPRNNDFYLCAHNGMIGTTRPT
HYHVLYDEIGFSTDDLQELVHSLSYVYQRSTTAISVVAPVCYAHLAAAQMGTVMKFEDMS
LSETSLTHGGITIPGAVPVPPMPKLNVNVASSMFFC
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtgataaaggaaaaggactaccacctcccccacctgtcgttccatccaacctt
gtacctgaactggagcctataaaaaagaacactcttcttccaatggcccggagaggcagc
gggaccaaaggagtgaagacacatcttcttaccaatcacttcagagtcaatttcaacaac
tcaaacggccatttttttcattacagtgttgcgattacatatgaagatggtcgtccagtg
gaggccaaaggaattggcaggaagattcttgaaaaggttcaggagacgtatcgaactgat
ctaggatccaaatactttgcctatgatggcgagaagactttgttcaccgttggtgctctt
cccagcaacaaactggatttctctgtcgttcttgaagacacatcttctagtaggaataac
actggaaatgctagcccgaatgaatcaaatgacgcagacaggaaaagatcgaggcgacca
aatcgatccaagaagttcatggttgagataagctatgctgcaaggatccccatgcaagct
attgcaagcgctcttcaaggaaaggaaacagattatcttcaagatgctataagagtgctc
gatgttattctgcgccagagtgcagctaggcagggatgcctacttgttcgccagtcattt
tttcacaatgacgtccagaactttgtacacatcggtggaggtgtcactggtgtcagaggc
ttccactcaagtttcagaactactcagggaggcttgtccttgaatatcgacacttcaact
acgatggtagtacaaccaggccatgtcgttgatttccttcttgtaaatcagaatgtgaaa
gacccaaagtatcttgactggaataaggctagacgtgctctcaagaatcttagagtacag
gttgccccctcaaatagagaatacaagataactggactaagtgaagagcgctgccaagat
caaatgtttactcggaattctaaaaacgagaagggggaagttgaggaagttcagactaca
gtatacaagtacttcaccgagtttcgcggtattccactgcgatattcaggtgactttcct
tgcatcaatgttggtaagccaaaacgcccaacattcattcctattgagcactgtgaactt
gtgagtctacagcgttacacaaaatcgcttaatagtcttcagagggcttcactggtagaa
aagtctaggcagaggccacctgaaaggatggcttcactaaccaatgtaggtcttctttct
attatccttgagactgaatattttctgtttaattttggttttatgttattcatcttgaag
ggtctgaagaagagcaactataatgctgacctggtgttgcaagaaagtggtgtcagcatt
ggctctagcttcactcaagtggagggacgtgttttaccagcaccaaggctgaaagtaggc
aatggagaggagtttcaacctcgcgatgggcgttggaacttcaattataagaaacttgtt
gagccagtcaccgttactaaatgggctgttgtgaacttctctgctcggtgtgatacaaat
aggcttatttctgacttgattagatgtggaaggatgaaaggaatcaacgtagaagctcca
tacaaagtcgtatttcaagaagatcctaattataggggtgcaccagccaacatcagagta
gaaaagatgttcgagcagatgcaatctgaactcagaaaaggaaaagaaggaaggccaaaa
ttcattctttgcattcttgccgaaaagaaaaactctcttgtttatgggccttggaagagg
agaaatcttgttgaagaaggaattgtgactcagtgtattgctcctacccccaaaataaat
gatcagtatctcaccaatgttctcctcaagataaatgccaagcttggtggactgaactcc
ctgttagctatggagcgctcacgagcaatgatgcctttagtaacgcaagttcctaccttc
attgttggcatggatgtatcccatggttcccctggacagtctgacataccatcatttgct
gctgttgtgggatccatagaatggccacttatctcaaaatatagggcgtgtgtgcgcaca
caatctcggaaagtggaaatgattgataatctcttcaaacccgccactaacgaaaaggga
gaacccgttgatgatggaattttcagtgagctcttgtgggacttttacttaagctcgaag
aagagaaaacctgagcacattatcattttcagggatggtgtgagtgagtctcagttcaat
caagttcttaacattgaattggatcagatgatgcaggcatgcaagtttgttgaagaaaat
tgggaacccaagttcacagtgatcattgcccaaaagaaccaccacaccaagttcttccag
gctgaaggccctggcaatgttcctccaggaacgataattgatagcaagatttgtcaccca
cgcaacaatgacttctatctctgtgcccataatggaatgattggaactacaaggccaaca
cattaccatgtgctctatgatgagattggattttcgacagatgacctccaagaacttgtt
cattctctatcctatgtctaccagaggagcaccactgccatctcagtcgttgcacctgtt
tgttatgctcatttggcggctgcacagatgggaaccgtgatgaagtttgaggacatgtct
ttgtctgagacatcattgacccatggcgggatcacaatacctggagcagtccctgtgcca
ccaatgccaaagttgaacgtgaatgttgcaagctccatgttcttctgctaa
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