Brassica rapa (field mustard): 103845906
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Entry
103845906 CDS
T03449
Name
(RefSeq) histone-lysine N-methyltransferase ASHR1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00310
Lysine degradation
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103845906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brp03036
]
103845906
Enzymes [BR:
brp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
103845906
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
103845906
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103845906
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
103845906
NCBI-ProteinID:
XP_009121061
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All DBs
Position
A07:2298214..2301799
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AA seq
488 aa
AA seq
DB search
MANLQSFLRDRCLTVLNLPDKGRSLFTSRDFRPGEVILRQEPYVSVPNNNSSESRCDGCF
KTDGLKKCSGCQVVWYCGSSCQKSEWKLHRHECKALCRLEKEKRMLVTPTIRLMVKLCLK
RNLQNEKVIPITTTDNYSLVEALVSHMSELDEKQLMLYAQMANLVNLILQFPGIDLKEIA
ENFSKFSCNAHSICDSELRPEGIGLFPLVSIINHSCSPNAVLVFEEKMAVVRAMEYISKD
SEVTISYIETAGSTLTRQKSLKEQYLFHCQCARCSNIGKPHDIEESAILEGYRCANEKCN
GFLLRDPDDKGFVCQNCMLLRSKEEVKKLAGDVKTVSAKALASPSAESICCLHKQDAIAL
YKTFEKLQEKLYHSFSITLMRTREKLLKMLMEVESWREALDYCKLIVPVYQRVYPATHPL
IGLQFYTQGKLEWLLGQTEEAVSSLIKAYDILRISHGTSTPFMKELSAKLDEARAEASYK
LLALKDGN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctgcagagctttcttcgcgatcgctgcttaaccgttttgaatctcccagac
aaaggccgctctctattcacctccagagactttcgtccaggagaagtgattctgaggcaa
gagccgtatgtttctgttccgaacaacaattcgtcggaatcaagatgtgacggatgtttc
aagaccgatggcttgaagaaatgttctggttgtcaagtggtttggtactgtgggagctcg
tgtcagaagtcagagtggaagttgcatcgccatgaatgcaaagctctctgtaggcttgag
aaggagaagcgtatgttagtgactcctacaatacgtctgatggtgaagctttgcctcaag
aggaacttgcaaaacgaaaaggtcataccgatcacgacaacagataattacagtttggtg
gaggctttggtgtcgcatatgtctgagcttgatgagaagcagctgatgttgtatgcgcaa
atggctaatcttgtgaacttgatacttcagtttcctggtattgatctcaaagagattgcc
gagaacttttcaaagttctcgtgcaatgctcatagcatttgtgatagcgaattgagacct
gaggggataggattgtttcccttggtttccatcattaatcacagctgctctcccaatgcg
gtattagtcttcgaagaaaagatggcggttgttcgagctatggaatacatatcaaaggat
tcagaggtaactatcagctatattgaaaccgctggaagcactctaactcggcagaagtct
ctgaaagaacaataccttttccactgtcagtgcgcccgatgcagtaacattggaaaacct
catgatattgaagaaagtgccatattggaaggctatcggtgtgccaatgagaagtgtaat
ggtttcttactccgtgatcctgatgataaaggctttgtttgccagaattgcatgcttctt
aggagcaaggaagaggtcaaaaagttggctggtgatgtgaaaacagtttcagcgaaggct
cttgcatctccttcggcagaaagtatctgttgcctacataaacaggacgccattgcgctg
tataagacgtttgagaaactacaagagaagctttaccattctttctcgatcactttaatg
agaactcgtgaaaagcttcttaagatgctgatggaagtagaaagctggagagaagctttg
gattactgcaaacttatagtccctgtttaccaaagagtatatccagcaacccatcctttg
attggactgcagttctatacccagggaaaactcgaatggttactggggcaaacggaagag
gcggtgagttcactgattaaggcatatgacattctgaggatcagccacggaacaagtaca
cctttcatgaaagagctctcagcaaagttggatgaagctcgtgcagaggcttcttataag
ttgcttgcattgaaagatggcaactag
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