Brassica rapa (field mustard): 103846122
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Entry
103846122 CDS
T03449
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103846122
Enzymes [BR:
brp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
103846122
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
103846122
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
103846122
NCBI-ProteinID:
XP_009121283
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All DBs
Position
A10:complement(11172530..11176228)
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AA seq
659 aa
AA seq
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MVLTRSKKRVAKSQTPPLKRAEKPQSLALKRKAEKPQALASKKGGAKSQKTPPLKKQKKE
AVVEEDPSEDDEEEVSDDAAASTDVESDDGEEEGSNGLGSSGFFSDDDGEENDDDGEELL
GDDFLEGSGDEEEHSDSGSGSDSDSDEGDIEKESKLIDEEEAKEEEDAKAELLDFNKEAG
DDAFRLPTEEELEEEARGPPDLPLLQSRIKEIVRALSNFSVLRPNGASRKDCVEQLKSDI
ASYYGYNSFLIGALFELFPPVELMELIEAFEKQRPTSIRTNTLKTRRRDLADVLLNRGVN
LDPLSKWSKVGLVVYDSQVPIGATPEYLSGFYMLQGASSFLPVMALAPQENERIVDVAAA
PGGKTTYVAALMKNTGLIFANEMKVPRLKSLTANLHRMGVTNTIVCNYDGRELPKVLGEK
SVDRVLLDAPCSGTGVISKDESVKVSKSLEEIKKFAHLQKQLLLAAIDMVDATSKTGGFI
VYSTCSLMVAENEAVIDYALKKRSVQLVKTGLDFGQDGFVRFREHRFHPSLNKTKRFYPH
VHNMDGFFVAKLKKMSNMKQASEDDDEALGTVDEADVPSDDDEAEAMEEMEKPKKTKESK
EGLAKSKESKKGKKSKSKKGEDPPKIKKQRKNRTEMRMEISQAREEKRKAMREKSKEKQ
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggttctcactcgtagcaagaagagggtggcgaaatctcaaacccctccgttgaagaga
gcggagaagccccaatccctggcgttgaagaggaaggcggagaagccccaagctctggcg
tcgaagaagggaggagccaagtcccagaagacacctccgttgaagaagcagaagaaggaa
gccgtcgtggaggaagatcctagcgaagacgacgaagaagaagtttccgatgatgcagcc
gcctctaccgatgtagaatctgatgatggagaggaagaagggtctaacgggttaggctcc
tccgggtttttctcggatgatgatggagaagagaacgacgacgacggtgaggagctcttg
ggtgatgactttctggaaggtagcggcgatgaagaggaacattcggattcgggttcgggt
tcagattctgactccgacgaaggcgatattgagaaggagtctaaacttattgatgaggaa
gaagcaaaggaggaggaagacgctaaggctgagctgcttgatttcaacaaggaagctgga
gacgatgcgtttcggctaccaactgaagaggaacttgaagaagaagctcgtgggccacca
gatctacctctacttcaaagtagaatcaaagagattgttagagctctgtcgaactttagc
gtcttgaggccaaatggagccagcaggaaagattgtgttgaacagctcaaatctgatatt
gcttcttattatggctataacagttttcttattggagctttgtttgagctgtttcctcct
gttgaacttatggaattaattgaagcctttgaaaagcaaaggcctacatctatccggaca
aacacacttaagactcgaagaagggatcttgctgatgtgcttctgaacagaggagtcaat
cttgacccactaagcaagtggtcaaaagtcggacttgttgtttatgattcacaagtgcca
attggtgcaacccctgagtatttgtctggattctacatgcttcaaggtgctagttcgttt
ttgccagtgatggcccttgcccctcaagagaatgagcgtattgtggatgtagctgctgct
cctggtggtaaaactacatacgttgctgctctaatgaaaaataccggcttgatatttgcg
aacgagatgaaagtacctaggctcaagtcgttgactgccaatctgcaccgcatgggcgtc
acaaataccatagtctgtaactatgatggaagagagctacccaaggtgttaggtgagaag
tcggttgatagagtactgttggatgcaccttgcagtggaactggggtcatttcgaaagat
gaatcagttaaagtttccaaatctctggaggaaattaagaaatttgctcacttgcaaaag
caacttttacttgctgctattgatatggtggatgccacttccaaaaccggtggatttatt
gtgtactcaacatgttcacttatggttgctgagaacgaagctgtcatcgattatgctctc
aaaaagaggagtgttcaactcgttaaaactggactcgacttcggccaagacggatttgta
agatttagagaacatcgatttcatccatctttaaacaagaccaaacgtttttatcctcat
gtacacaacatggatggattctttgttgcaaagctaaagaaaatgagtaacatgaaacaa
gcttcagaagatgatgacgaggcgttaggaactgtagatgaagctgatgtgcccagtgat
gatgatgaagctgaggccatggaagagatggagaaacccaagaaaactaaagaaagcaag
gagggacttgcaaaatcaaaggagagcaaaaaaggcaagaaatcaaaatctaaaaaaggt
gaggatccacctaaaataaagaagcaaaggaagaacagaactgaaatgaggatggagatt
tctcaagctagggaagagaaaaggaaagcaatgagagagaagtcgaaggagaagcaataa
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