Brassica rapa (field mustard): 103846254
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Entry
103846254 CDS
T03449
Name
(RefSeq) homeobox-leucine zipper protein HDG10
KO
K09338
homeobox-leucine zipper protein
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103846254
Transcription factors [BR:
brp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
103846254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
DUF7886
Motif
Other DBs
NCBI-GeneID:
103846254
NCBI-ProteinID:
XP_009121397
UniProt:
M4CWG5
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All DBs
Position
A10
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AA seq
723 aa
AA seq
DB search
MASSRDSSSSDEDETSFNTSDGDKKNYNRHSNHQIQRLEAYFKECHHPDDSQRLKLGEEL
KLKPKQIKFWFQNKRTQAKTQSEKADNAALRTENMKIRRENEALQAALNTVTCPPCGGPR
PGKGERTLYLQNLRTHNTYLREERDRLSSLVNKSEGHSRPSFNALAYHHGPSLYASASNN
PHVTYGSSSNYRVEPSSLVKEPYSRERINIGQPPQPRNPIQLQRFQTLSQMEKVTMTEAM
VTAMTEVITLIQTEESMWIQSSIDGRLVIDQKNYEKTFTNPSHFKSPSSRIESSKEVAVI
PMDAKNLVNMLLDTEKWANLFSTIVSEAKTIHVLESMDPRRNFSKLMYEQLHILSPLLPP
REFMILRCCQQLEEDVWVIADVSYHQVAFEFEFETPACVKRPSGCLIQALPNGHSKVTWM
EHVEVNDKVRSHRIYRDLLCGGFGYGARRWTATLERMCERLSLYSISGLPTTDFPGVVDT
MDGRKRVMDLGERMLKNFAWILKMPEKSGFSQQTATNSSGVRISVRVNEEVGQPAGLIVC
AGLSLCLPLAPLQVYSFLKNLEVRHQWDVLCQASPVTEVARFVTGTDNKNCVNILKPSSA
TENGALMIIQDSFIDALGGMVVYAPVDLRTAHAAFLGNVDPSSIPILPSGFVISRDGRPP
SAAELDGGLDNCKTLLTVAFQILVTGPAMFEEDQMNEWTTKVHTLLSSTIRRVKGMLNCD
DAQ
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcttctagtcgtgatagcagttcaagtgatgaagatgaaacttcgtttaacacaagc
gatggagataagaagaattacaatcgccactctaaccatcaaattcaaaggctcgaagcg
tatttcaaggagtgtcatcatccggacgactcacagcgacttaaactgggagaagaactg
aaacttaaaccaaaacaaatcaaattttggtttcaaaacaaaagaacacaagccaaaact
caaagtgaaaaagcagacaatgcagcacttagaacagagaatatgaaaataagacgtgag
aacgaagcactgcaagcagcattgaacactgtgacttgcccgccatgtggtggccctcgt
cctgggaagggagaacgcacactctatctccaaaacctccggacacataacacatatctc
agagaagagcgtgatagactctcaagtctggtaaacaagagcgaaggccactcgagacct
agcttcaatgctttggcctatcaccatggtccatcactgtatgcttcagcttccaacaat
ccacatgtcacatatggaagctcttccaactatcgcgtggagccatcaagcttggttaaa
gaaccatactctcgtgaacgcataaacattggccagccacctcaaccgcgaaaccctata
caactgcaacgtttccagacgctatctcaaatggagaaagtaacgatgactgaagcgatg
gtaactgccatgacggaggtaataactctaattcaaactgaagaatcgatgtggatccag
tcatcaatcgatggtagactcgtcattgatcaaaagaactatgagaaaacttttaccaat
cccagtcattttaagagtccaagttctcgtattgagtcttccaaggaagtcgcggtgatt
ccaatggatgccaaaaacttggttaacatgcttttagatacggagaaatgggctaatctt
ttctcaacaattgtgagtgaagctaaaacgattcacgtgctagaatccatggatccacga
agaaacttctcgaaattgatgtatgagcaactgcacatactgtcgccattgctgccgccg
agagagtttatgatcctaagatgttgccaacaattggaggaagatgtatgggtgattgct
gacgtttcgtaccatcaagtagcctttgagtttgagtttgagactccggcttgcgtcaaa
cgtccttccggttgtctcatccaagccttgcccaatggtcactctaaggtgacgtggatg
gagcacgtggaggtaaatgataaagtccggtcacatcggatttacagagacctcttatgc
ggcggctttggctacggagctcgccgttggaccgctactcttgagagaatgtgtgagagg
ctgtctctctactccatctctggcttgcctaccaccgacttccccggagttgtggacacc
atggacggaagaaagagggtcatggatttaggagaaagaatgttgaagaatttcgcatgg
atattaaaaatgcctgaaaaatccggtttttcgcaacagactgcaaccaacagtagcgga
gttaggatatcggtgcgggtaaacgaagaagtaggtcaacctgccggtctcattgtctgc
gctggtttatctttatgtctccctctggctcctctccaggtctacagcttcctcaaaaat
cttgaggttcgccaccagtgggacgttctctgccaagcgagtccggtcactgaggtcgct
cgctttgtcactggaacagacaataagaattgtgtgaatatcctcaagccttcaagtgca
acggagaatggtgccttgatgataatacaagacagcttcatagacgcattaggaggtatg
gtggtctacgcaccagtggacctaaggacagcacacgctgcctttttaggcaatgtcgat
ccttcaagcattccaatcctcccatccggtttcgtcatctcccgtgacggccgtcctcct
tctgccgctgagctagacggtggcctcgacaattgtaagacgctcctcacggtggctttc
cagatcctcgtcactggtccggctatgtttgaagaagaccaaatgaatgaatggaccacc
aaagtccataccttgcttagctcgactatccgaagggttaaaggcatgcttaactgcgat
gatgctcagtga
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