Brassica rapa (field mustard): 103846292
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Entry
103846292 CDS
T03449
Name
(RefSeq) heat stress transcription factor A-1b isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103846292
Transcription factors [BR:
brp03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
103846292
SSDB
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GFIT
Motif
Pfam:
HSF_DNA-bind
Leu_zip
Motif
Other DBs
NCBI-GeneID:
103846292
NCBI-ProteinID:
XP_009121441
UniProt:
M4CWJ6
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Position
A10
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AA seq
483 aa
AA seq
DB search
MEPVLEPAPYVNSNPLPIPPPLNSVPPFLSKTYDMVDDPSTNEVVSWSSGNNSFVVWDVP
EFSKVFLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRDQKQLLKGITRRKSS
HVQQQTQVQNSSLAPCVEVGKFGIAEEVERLKRDKNVLMHQQQATENQLKDAVQKVQAME
QRQQQMMSFLAKAVQSPGFLNQLVAQQSNDGNRQIQGSSNKKRRLPGEEANDVDRQIVKY
QPSINEAAQTMLRQFLNMSSSPESESVPNNPGSFSPSSLNSSNTVSGVTLPEVSPDSAHS
AAMNQVPDAGLAHHPQAGLVHPNLGPSPAAATWSPESECKTGNGECLDPIMAALGGSLEM
EGDAVSPEGEGEVKELLVPQLPGVQDPFWEQFFADEAPVSGETDETISGSVETMEQELRE
WTRDQQQVNHITEQTGFLSSETHGGKNEKHVLCIIVLPFVFHRCIFFRGGCEGDMNGGGG
DIS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaaccggttcttgaaccagcaccgtacgtgaactcaaacccgttgcctataccgcct
cctttgaactcggtgccgccttttttgagcaaaacctacgacatggttgatgatccttcc
accaatgaggtcgtttcttggagcagcggaaacaacagcttcgtcgtctgggacgttccc
gagttctcgaaggtgttcttgcctaagtacttcaagcacaataatttctccagcttcgtc
agacagttaaatacttatggattcagaaaagttgatccagatcgatgggaatttgcaaac
gagggatttttaagagaccaaaaacaactactaaagggtattacaaggaggaaatcatcg
catgtgcagcaacaaactcaagttcagaactcatctcttgctccttgtgtcgaggtaggg
aagtttggaatagcggaagaagtggaaagactcaagagggataagaacgttcttatgcat
caacaacaggccaccgagaaccagctgaaggacgcggtgcagaaagttcaggcgatggag
cagaggcaacagcagatgatgtcgtttttagcgaaggctgttcagagtccaggcttcttg
aaccagttagtagcacaacagagtaatgatggtaacagacagattcagggaagcagtaac
aaaaagaggaggcttcctggggaggaggctaatgatgttgatcgtcagattgttaagtat
cagccatccataaatgaagcagcacaaactatgcttcgacagttcttgaatatgagtagc
tcacctgagtctgaatcggttccaaacaatcctggcagtttcagtcctagctctctgaac
tcctcgaatacagtttctggagtaacactgcccgaggtttcacccgactcagctcattca
gcagcaatgaaccaagtacctgatgcaggtttggctcatcatcctcaagctggtctggtt
catccaaacttaggtccaagtccagctgcagctacttggagccctgaatctgaatgcaag
acaggtaatggagagtgtttggatccaataatggctgctttaggtgggtcgttggagatg
gaaggcgatgcagtttctcctgaaggtgagggagaggtgaaagagttactggtccctcag
ctgcctggagtccaagacccattctgggaacagttttttgctgatgaagccccagtgagt
ggagagacagacgagactatatcagggtcagtggagacaatggagcaagaactgagggag
tggactagggatcaacaacaagtgaaccatatcactgaacaaacggggtttctttcttcg
gaaacacatgggggtaagaatgaaaaacatgttctctgcattattgttctgccatttgtc
tttcacaggtgtatatttttcaggggaggctgtgaaggggatatgaacggaggaggagga
gatatatcatag
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