KEGG   Brassica rapa (field mustard): 103846358
Entry
103846358         CDS       T03449                                 
Name
(RefSeq) ubiquitin receptor RAD23c-like
  KO
K10839  UV excision repair protein RAD23
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03420  Nucleotide excision repair
brp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103846358
  09124 Replication and repair
   03420 Nucleotide excision repair
    103846358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:brp03051]
    103846358
   03400 DNA repair and recombination proteins [BR:brp03400]
    103846358
Proteasome [BR:brp03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    103846358
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      103846358
SSDB
Motif
Pfam: ubiquitin UBA XPC-binding Rad60-SLD Dsc3_N TECR_N UBA_7 Ubiquitin_2 Rad60-SLD_2 Ubiquitin_4 HBS1_N
Other DBs
NCBI-GeneID: 103846358
NCBI-ProteinID: XP_018511019
LinkDB
Position
A10:16302378..16305200
AA seq 342 aa
MKIFVKTLKGARFEIQVKPEDSVADVKKNIETVLGVNAYPAAEQRLIHKGKVLKDETTVE
ANNVSEKSTIGVMKRKPASASLKPLYESISENNIQWILEMSGGEWERDLVEDALYLAYND
IDKAVEYIYFGLPVDSEYPSITEFENVRPRVQSDPSLLEELLVQIEDLFITEGETHQEPD
ERPSAADLEQSLDFARYTQEYDREYLRALARSHPSIVKDFVEMVHEDNPLFFQFIRDNKA
DILRLLREGGTGGTEMEQPREHPAVETNEPKNGGDGGNQVGESKETEVEVVTPEDYELIE
RLEALGFERGDAAVAYFACNRNLQVAANHLLGYKHKHEPRRE
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgaagatattcgtcaaaactctgaagggagctcggttcgagatccaagtcaaacccgag
gattcggttgctgatgtgaagaagaacatagagacggtgctgggagttaatgcgtatcct
gctgcagaacaaaggcttattcacaaggggaaagtgctgaaagatgagacaacagtagag
gctaacaacgtttccgagaaaagcactattggcgttatgaagagaaaacctgcatctgct
agccttaaacctctgtatgaaagtatttcagagaataacattcagtggattcttgagatg
tccggaggagagtgggagcgtgacctggttgaggatgcactctatttggcatataatgac
attgataaagctgtggaatatatttactttgggttgccggtggacagtgaatatccttct
ataacagagttcgagaatgtacgacctcgggtgcagtcagaccctagtctcttagaggag
ctcctggtgcagattgaagatcttttcataacggagggtgaaactcatcaagaacctgat
gaacgtccttcagcagccgacctagaacagtcacttgatttcgcgcgttacactcaagag
tacgatcgcgagtatctacgagctttggcgcgatcacaccctagtatcgttaaggatttt
gtggagatggtacatgaagacaatccgctattttttcagtttattcgagacaacaaagca
gacatcttacgcttactacgtgaaggaggaacaggcggcaccgaaatggagcagcctcgt
gaacacccagcagtcgagaccaacgaaccaaagaatggaggagatggtggcaaccaagta
ggagagtctaaagaaaccgaagttgaagtcgtcacccctgaggattacgaattgatcgaa
cggctagaagcattgggatttgagagaggtgatgcggcggtggcgtacttcgcttgcaat
aggaacctccaagtggctgcaaaccatcttctcggttacaagcacaagcacgagcctcga
cgagaatga

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