Brassica rapa (field mustard): 103846412
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Entry
103846412 CDS
T03449
Name
(RefSeq) chaperone protein ClpB3, chloroplastic
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
brp03110
]
103846412
Chaperones and folding catalysts [BR:
brp03110
]
Heat shock proteins
HSP100
103846412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_16
AAA_22
nSTAND3
AAA_14
AAA_18
TniB
IstB_IS21
Zeta_toxin
AAA_7
RNA_helicase
Mg_chelatase
AAA_28
AAA_25
NACHT
AAA_24
NBD_SMAX1
ResIII
Torsin
KIF9
Motif
Other DBs
NCBI-GeneID:
103846412
NCBI-ProteinID:
XP_009121574
UniProt:
M4CWV1
LinkDB
All DBs
Position
A10:16512158..16516239
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AA seq
973 aa
AA seq
DB search
MATAKTTATAAFSGIVGGVGSDSRKVSSFSHLQPSVAFPAKPTSFKALKLKQSARLTRRL
QHQPFVVRCEASSNGRLTQQEFTEMAWQSIVSSPDVAKENKQQIVETEHLMKALLEQKNG
LARRIFSKIGVDNTKVLEATDKFIQRQPKVYGEAAGSMLGRDLEGLFQRARQYKKDLGDS
YVSVEHLVLAFVDDKRFGKQLFRDFQISEKSLKTAIESIRGKQSVIDQDPEGKYEALEKY
GKDLTAMAREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIV
QGDVPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTDSEGQTILFIDEIHTVV
GAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVE
DTVSILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKME
ITSKPTALDELDRAVIKLEMERLSLTNDTDKASRERLNRIETELVLLKEKQAELTEQWEH
ERSVMSRLQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLNEAEKELNEYL
SSGKSMFREEVLGSDIAEIVSKWTGIPVSKLQQSERDKLLHLEEELHRRVIGQNPAVTAV
AEAIQRSRAGLSDPGRPIASFMFMGPTGVGKTELAKALASYLFNTEEALVRIDMSEYMEK
HAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYSVILFDEIEKAHGDVFNVFLQILDDGRVT
DSQGRTVSFTNTVIIMTSNVGSQYILNNNADDEGSELGYETIKQRVMDAARSIFRPEFMN
RVDEYIVFQPLDREQINSIVRLQLARVQKRIADRKMKIEITDAAVDLLGSLGYDPNYGAR
PVKRVIQQNIENELAKGILRGDFKEEDGILIDTEVTAFSNGQLPQQKLTFKKIASETADA
EKEEEEAFSKQSN
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggctaagacgactgcaacggcggcgtttagtggtatcgtcggcggcgtagga
tcagactcccgaaaggtttcctctttctctcacctccaaccttccgtggctttcccggcg
aagcccacttccttcaaagcactgaaactaaagcagagcgcgaggctcactcgaagactt
caacatcaaccgttcgtcgtccgatgcgaagcttcttctaacggaaggcttacacagcaa
gagttcacagagatggcgtggcaatcgatagtctcttcaccagacgtggctaaagagaac
aagcagcagatcgtggagacggagcatcttatgaaagctcttttggagcagaagaacggt
ttagctcgaaggatcttctctaagatcggtgtggataacactaaggttttggaagcgacg
gataagttcattcaacggcagccaaaggtgtatggagaagctgctggttcgatgttgggg
cgtgatttggaaggtttgtttcagagggcgagacagtataagaaagacttgggggactct
tatgtctctgtggagcatttggttcttgcttttgttgatgacaagcggtttgggaaacag
ctgtttagggattttcagatatctgagaagagtttgaaaactgctattgagtctattaga
gggaaacaatcagtcattgaccaagatccggaaggcaagtatgaggcgttggagaagtat
ggtaaagatttgacagcgatggcgagagaagggaagcttgatcctgtgattggaagagat
gatgagatccgtagatgcattcagattctctcaaggaggactaaaaataaccctgtgttg
atcggtgaacctggtgttggtaaaaccgcaatctcagaaggacttgctcagaggattgtg
caaggagatgtacctcaagcattgatgaacagaaagttgatatctcttgatatgggggca
cttattgctggagcaaagtatcgaggagagttcgaagatagactaaaggctgtacttaag
gaggtcacagactcagaaggccaaactattctgttcatcgatgagatacacacagttgtt
ggtgcaggtgctactaatggggcaatggatgctggtaatctactaaaaccaatgttgggt
cgaggcgagctaagatgcatcggcgcaacaacgcttgatgaatatagaaagtacatagag
aaagatccagccttggaacgcaggtttcaacaggtttacgttgatcaacctaccgtggaa
gacacggtttcgatcctccgtggtttgagagaaaggtacgaacttcatcacggagttcgc
atctcagacagtgctctagtggaagccgctattctctctgaccgttacatcagcggccgg
ttcctacctgacaaagcgattgacttggttgatgaagcagcagccaaactaaaaatggaa
atcacttcaaaaccaacagctctcgacgagcttgaccgcgcggtgatcaagctcgaaatg
gagagactctcactcaccaacgacacagacaaagcttcaagagagaggctaaaccggatc
gaaacggagttagtcttgctaaaggagaagcaagccgagttaaccgagcagtgggagcac
gagaggtccgtcatgtcccgtctccagtccatcaaagaggagatagatcgtgtcaacctc
gagatccagcaagcggagcgcgagtacgatctaaaccgcgcagcagagctcaaatacgga
agcctaaactctctccagcgtcagctaaacgaagctgagaaggagctcaacgagtactta
agctctggcaagtctatgtttagagaagaggtgttaggcagcgacatagcagagatcgtg
agcaaatggactggcatccctgtctccaagctccaacagtccgagagagataagcttctg
cacttggaagaggagctgcatagacgagttataggtcagaaccctgcagttacggccgta
gccgaagcgatccaacggtctagagccggcctgtcggatccaggccgtccgatagcttcc
ttcatgttcatgggaccgacaggagtcggcaaaaccgagctggccaaggcgctagcttct
tacctcttcaacacggaggaagctctggtgaggatcgacatgagcgagtacatggagaaa
cacgcggtctcgaggctcatcggagctcctcccggatacgtgggatacgaggaaggaggg
cagttgactgaagtggttaggaggaggccttactcggtcatcctcttcgacgagatcgag
aaggctcatggagatgtgttcaacgtgtttctccagatcttggacgatgggagggttact
gactctcagggacgtacggtgagtttcaccaatacggttattatcatgacctcgaacgtt
ggctcgcagtatatactgaacaacaacgcggatgatgaggggagtgagctcggttatgag
acgattaagcagagagtgatggatgctgcgagatcgatctttcgtcctgagtttatgaat
agggttgatgagtatattgttttccagcctcttgaccgtgagcagatcaacagcatcgtc
cggttacagctggctcgtgtgcagaagcggattgcggataggaaaatgaagatagagatc
acagatgcggcggtggatcttctcgggagcctcgggtatgatcctaactacggagctaga
cctgttaagcgtgtgatacagcagaacattgagaacgagctggcgaaaggtatcttgaga
ggagatttcaaggaagaagatggcattctgatcgatacagaggtcacagcgttctccaat
ggtcagttacctcagcaaaagctcacattcaaaaagattgcgtcagaaacggcagatgct
gagaaggaggaagaagaagctttctcaaaacagagcaattga
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