Brassica rapa (field mustard): 103846441
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Entry
103846441 CDS
T03449
Name
(RefSeq) probable pectate lyase 19
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00040
Pentose and glucuronate interconversions
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103846441
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103846441
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
103846441
NCBI-ProteinID:
XP_009121613
UniProt:
A0A397XLV7
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Position
A10:complement(16641486..16643832)
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AA seq
499 aa
AA seq
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MEMARLLKLMCVFCIAGLIPTIKANISELDEYWSQRADEAREFTLQAYHSDPYEIVDHFH
ERHYDNSTDDTTTEEHSSNSTDVTATEEDNSNSTDVTATEEDSSTKPEEEGTEVIEMVGN
SKNSTRRSLKGKGKGKWSKLKGPCTASNPIDKCWRCRSNWANRRKKLAKCVRGFGHGTTG
GKRGRIYVVTSNLDEDMVNPIPGTLRHAVIQKEPLWIIFKNDMSIRLSQELLVNSDKTID
ARGADVHIAHGAGITMQFVRNVIIHGLHIHHISESNGGMIRDSVDHFGMRTRADGDGLSI
YGSSNIWIDHVSMSKCQDGLIDAIVGSTAITISNSHFTHHNDVMLLGAQNNMNEADQKMQ
VTVAYNHFGKGLVQRMPRIRWGFVHVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHL
PYYKEVTKRDYASEDEWKHWTWRSEKDIFMNGAFFRQSGDPHYKSAHTRKQMIKPKNGYA
VSKLTKYAGALDCRVGRRC
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggagatggctaggttgttaaagttgatgtgtgtgttctgtattgctggtctgattccg
accataaaagccaacatttcggagttggacgagtattggtcacaacgagccgacgaagcc
cgagagttcactcttcaagcttatcattctgatccttacgaaatcgtggatcactttcat
gaacgtcactacgacaactctactgatgataccacgacagaggaacatagtagcaactct
actgatgttaccgctacagaggaagataacagcaactctactgatgttaccgcgacagag
gaagatagcagcacaaagcctgaagaggagggaactgaggtcattgaaatggtcggaaac
tcgaagaacagcactagaagaagcttaaaaggtaaaggcaaaggaaaatggagcaagctt
aagggaccgtgtacagcaagtaacccgattgataaatgctggcgttgccgttcgaattgg
gctaaccgtcgtaagaagcttgcaaaatgtgtccgcgggttcggccacgggacgaccggt
gggaaacgtggacgtatctacgtggttacaagcaacctcgacgaggacatggtgaaccct
ataccagggacattgcgtcacgccgtgattcaaaaggaacctctctggatcattttcaag
aacgacatgagcattcgtttaagtcaagagcttttggttaatagcgacaagacgatcgat
gcacgtggagctgatgtccatatcgcacatggcgcagggataacgatgcagtttgtgaga
aatgttattatccatggactgcacattcaccacatttccgagagtaacggtggtatgatc
cgagactcggtagaccattttggaatgaggactagagccgatggtgacggtctatctata
tacggctcgtctaacatatggattgaccatgtttcgatgtcgaaatgtcaagatggactc
attgatgccattgttggatccactgccattacaatctccaactctcacttcactcaccac
aacgacgtgatgttgcttggtgcgcaaaacaatatgaatgaagcggaccagaagatgcaa
gtcacagtggcttataaccattttggtaaagggcttgtacagaggatgccaaggatccga
tggggatttgttcacgttgtgaacaatgactacactcattgggagctttacgctatcgga
ggtagtcaagggccgactattctcagccacggaaaccgattcatagctcctccacactta
ccttattacaaagaggtgacaaagagggattatgcttcggaagacgagtggaaacactgg
acatggagatctgagaaagatatattcatgaacggagcttttttcagacaatctggggat
cctcattacaaaagtgctcacacgagaaaacaaatgattaaacctaaaaatggatatgct
gtttctaagctgaccaaatacgcaggagcacttgattgcagagtcggtagacgctgttag
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