KEGG   Brassica rapa (field mustard): 103846658
Entry
103846658         CDS       T03449                                 
Name
(RefSeq) geranylgeranyl transferase type-2 subunit beta 1 isoform X1
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:brp01006]
    103846658
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103846658
Enzymes [BR:brp01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     103846658
Prenyltransferases [BR:brp01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   103846658
Membrane trafficking [BR:brp04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    103846658
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    103846658
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_N SQHop_cyclase_C
Other DBs
NCBI-GeneID: 103846658
NCBI-ProteinID: XP_009121869
LinkDB
Position
A10:complement(17440215..17443034)
AA seq 322 aa
MSSSSSSSQMGQLVADKHVRYILMSEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGS
VSVDEVVSWLMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLDILDVGKVSSYVAG
LQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVEKAVDYIVSCKNLDGGFGCTP
GAESHAGQIFCCVGALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
LSSLIMIDRVHWIDKAKLVKFILDCQDLENGGISDRPDDAVDIFHTYFGVAGLSLLEYPG
VKAVDPAYALPVDVINRILLTK
NT seq 969 nt   +upstreamnt  +downstreamnt
atgagctcttcctcttcttcctcccagatgggtcagcttgtagctgacaagcatgtacgt
tacattctcatgtcagaaaagaagaaagagagttttgagtcggtggtgatggatcatcta
agaatgaatggtgcgtactggggactcaccactcttgacttactcgacaagcttggctct
gtttccgtagacgaagtcgtttcatggctcatgacttgccagcacgaatctggtggcttt
gctggaaatactggacatgatccacatgttttatatacactgagtgctgttcaaatcttg
gccctctttgacaaactagacattcttgacgttggaaaagtatcaagttatgttgctggt
ttgcagaatgaagatggatccttctcaggagatatctggggagaagtagatacgaggttt
tcttacattgctatttgctgtctctcaatattgaaatgtcttgacaaaatcaatgtagag
aaggccgttgattatattgttagctgcaaaaaccttgacggtggctttgggtgcacaccc
ggagcagaatcacatgcaggacagattttctgttgcgtgggtgctcttgctatcaccggg
agcctccatcatgttgataaggacttgctcggttggtggttatgtgaaagacaagtcaag
tccgggggtttgaatggacgacccgagaagctccctgatgtttgttattcgtggtgggtc
ctatcgagcctaatcatgatagatagagttcactggatcgacaaagcaaagcttgtcaag
ttcatcttggactgtcaggatttggagaacggaggcatctcagacagaccggacgatgct
gttgatatcttccacacctactttggagttgcagggctttccctcctcgagtatcctgga
gtgaaagcagttgatccagcctacgctttacctgttgatgtcatcaatcgaattctccta
accaaatga

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