Brassica rapa (field mustard): 103846688
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Entry
103846688 CDS
T03449
Name
(RefSeq) diaminopimelate decarboxylase 2, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00300
Lysine biosynthesis
brp00470
D-Amino acid metabolism
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
brp01230
Biosynthesis of amino acids
Module
brp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
103846688
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
103846688
Enzymes [BR:
brp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
103846688
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
103846688
NCBI-ProteinID:
XP_009121909
UniProt:
M4CXI4
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All DBs
Position
A10:17540628..17542851
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AA seq
486 aa
AA seq
DB search
MASSTQLLSQPPSLRGNLNRYQSSLPRISILSLKSTSKPLNRLSVKATAAASQNSVKTPT
KDAAFKHCFKKSSDGFLYCEGTKVEDIMESVERRPFYLYSKPQITRNVEAYKEALEGVRS
VIGYAIKANNNLKILEHLRSKGCGAVLVSGNELRLALLAGFDPTKCIFNGNGKLLEDLVL
AAQEGVFVNVDSEFDLENIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIR
NEKLQWFLDEVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVEYIDEIRRQGFEVSY
LNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTG
VKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPPAPEAEVSKFDVVGPVCESADFLG
KDRELPTPPKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDDGSITKIRHAETFEDHL
RFFNGL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatctactcagctcctctcccaacctccatctctccgcggaaacctaaaccga
taccaatcctccctcccaagaatctcaattctgtctctcaagtccacctcgaaaccactt
aaccgcctctccgtcaaagccaccgccgccgcatcccaaaactcggtgaaaaccccgacg
aaggatgctgcgttcaagcactgtttcaagaaatcctcagatgggttcctctactgcgag
ggaactaaggttgaggatatcatggagagcgtcgagagaagacctttttacttgtacagc
aagcctcagatcacgaggaacgtcgaggcttacaaagaggccttggaaggtgtgaggtcc
gtcattggctacgctattaaagctaataacaacctcaagattctggagcatttgaggagt
aaaggatgtggtgctgtcctcgttagtgggaacgagctcaggcttgctcttctcgctggt
ttcgatccaacaaagtgtattttcaatggaaatgggaagctgttggaggatttagtttta
gctgctcaagaaggagtttttgtaaatgttgatagtgagtttgacttggagaatattgtg
gaagcttcgagaatctctggtaagcaggtcaatgttctgctgcgtatcaatcctgatgtg
gatcctcaggtgcatccatatgtagctacggggaacaagaactcaaagtttggtatcagg
aacgagaagcttcagtggtttctcgatgaggtgaaggctcatcccaatgagctcaagcta
gttggagctcattgccatcttggctccaccattacaaaggtggatatattcagagatgct
gcggttctcatggtggagtacattgatgagatcaggcgtcaagggtttgaagttagttac
ttgaacattggtggtggtttagggattgattattaccatgccggtgctgtccttcctaca
cctatggatctcatcaacacagtaagagagcttgttctgtcacgagacttgaatctaata
atcgagccagggaggtcgttgattgcaaacacgtgctgtttcgtcaaccatgtaaccggt
gtgaagacaaatggaactaaaaactttattgtgatcgatggaagtatggctgagctaatc
cgtcccagtctttatgatgcctatcagcacattgagttggtctctcctccagcacctgaa
gcagaggtttccaaattcgacgtagtgggtcctgtttgtgaatctgctgatttcttgggc
aaagacagagagcttcccactcctccaaagggagctggtctagtggttcatgatgctggt
gcatactgtatgagcatggcttccacttacaatctcaagatgcgtcctccagaatactgg
gttgaagatgatggatcgatcactaagatcaggcatgctgagacattcgaagaccatttg
cgtttcttcaacggtctatag
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