KEGG   Brassica rapa (field mustard): 103846868
Entry
103846868         CDS       T03449                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103846868
   03400 DNA repair and recombination proteins [BR:brp03400]
    103846868
Enzymes [BR:brp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103846868
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103846868
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    103846868
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 zf-RING_5 ResIII zf-rbx1 zf-RING_UBOX zf-ANAPC11 DEAD RING_XB3-XBAT31 Prok-RING_4 GNT-I AAA_34 zf-Nse zf-C3HC4_4 zf-RING_10 HDA2-3 TRAF3_RING
Other DBs
NCBI-GeneID: 103846868
NCBI-ProteinID: XP_009122123
LinkDB
Position
A10:18279408..18285246
AA seq 848 aa
MSRLLLHFSSSPMANEDDSPSSAEPSQQSQDENSERYMVGFIIANIVGLKYYSGRINGRE
LVGLVREPSNLYDENAIRVLNTRSLQVGHIERAVAAVLSPLIDSGKILVEGIVPNTRSTA
NRFRIPCQVHVFAKLEETADVKSAISRAGLVLISDSDTSFGLSEAVVVKERMGGGGEKKS
VDKIFKLVDENVKQKEKMVEVEAPREVIKSELFAHQKEGLGWLLNREKDGELPPFWEEKG
GDFVNVLTNYRTDKRPEALRGGVFADDMGLGKTLTLLSLIAFDRYGDDASTSTEETFDVG
EKKGRKRGRGKSSESGGARKKVKSQKTTLIVCPPSVFSAWITQLEEHTVAGCLKVYMYHG
GERTDDVNELMKYDIVLTTYSTLALEEPWEDSPVKKMEWLRIVLDEAHTIKNANAQQSKA
VCNLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKSGLSR
LQVLMATISLRRTKEKSSIGLPPKTVGTCYVDLSPEERQLYDHMEGEAKGVVQNLINNGS
LMRNYSTVLSIILRLRQLCDDISLCPPELRSLTTLTSIEDVTDQPELLQKLVAILQDGED
FDCPICISPPRDIIITRCAHIFCRSCILQTLQRTKPSCPLCRGSLTQSDLFNAPPPPEAP
DNDGGETKPSTKSSKVTALLSLLMASRQENPNTKSVVFSQFKKMLLLLETPLKAAGFTVL
RLDGAMTVKKRTQVIKDFGKPELTGPVVLLASLKASGAGINLTAASRVYLFEPWWNPAVE
EQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEAFKRRRGKDQREVNIE
DVVALMSL
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgtctaggttgcttctccacttctcttcctctcccatggcgaacgaagacgactccccc
tcctccgcggagccctcgcagcaatctcaggacgaaaactcagagcgatacatggtggga
ttcatcatcgcgaacatcgtagggctaaagtactactcggggcgaatcaacggccgagag
ttagtcggcctcgtccgagagccttcgaatctctacgacgagaacgcaatcagagtcctc
aacacgcgatccctccaagtgggccacatcgagcgcgccgtcgccgccgtcctctcgcct
ctgatagactccgggaagatcctcgtcgaaggcatcgtgcccaacactcgctccacagcc
aataggttcagaatcccctgccaagttcacgtctttgcgaagctggaggagacggcggat
gttaaatcggcgatttcgagggccgggctggtgttgatttcggattcggacacttccttt
gggttgtctgaggctgttgtggttaaggagcggatgggtggtggtggggagaagaagagt
gtggataagatttttaagcttgttgatgagaatgtgaagcaaaaggagaagatggttgag
gttgaggcgcctagggaggtgataaagtctgagcttttcgctcatcagaaggaaggtttg
ggttggttgttgaatagggagaaggatggtgagcttcctccgttttgggaggagaaaggt
ggagactttgttaacgttttgacgaattaccgtactgataaaaggcctgaggctttgcgt
ggaggtgtgtttgctgatgatatggggttggggaagactcttacgttactttcgttgata
gctttcgatagatacggtgatgatgcatccaccagtacggaggagacttttgatgttgga
gagaagaagggtaggaagagagggagagggaagagcagtgagagtggaggagcgaggaag
aaggttaagtctcagaagacgacgttgattgtttgtccaccttctgtgttctcagcgtgg
atcacgcagctagaagagcacactgtagctggatgcttgaaggtgtatatgtatcatgga
ggcgagaggacagacgatgttaacgagcttatgaagtatgatatagtgttgactacttac
agcactttggctcttgaggaaccttgggaagattctcctgttaagaagatggaatggctg
agaatagttttggatgaggcacacactattaagaacgcgaacgctcagcagagcaaggcg
gtttgtaatctgaaggcttctaggagatgggctgtcacaggaactcctattcagaatggt
tcgtttgatttgtactctctgatggcgtttctccggtttgagccgttttcgataaagagt
tattggcaaagcttgattcaacgcccgcttggtcaagggaataagagtgggctctcacgt
ttacaggtcttaatggcgacaatctcgttgaggagaacgaaggagaagagttcgattggt
ttgccacctaagactgttgggacttgttatgttgatctttctccggaagaacgtcagtta
tatgatcacatggaaggagaagccaaaggtgttgtgcagaatctcataaacaatggaagc
ttgatgagaaactactcaacggttttgagtataatcttacggcttagacagctttgtgac
gacatttctctatgccctcctgaactaagatctttgaccactttaacatctatagaagat
gtgactgatcagccagagctgctgcaaaaacttgttgctatattgcaagacggcgaagat
tttgactgtccgatttgcatttctccaccgagagacatcatcatcactcgatgtgctcac
atcttttgcaggtcctgcattctccaaacccttcaaagaactaaaccttcttgccctctt
tgccgtggctctctaacccaatcagatctcttcaacgctcctcctcctcctgaagctcca
gataacgacggaggagagaccaaaccttcaaccaaatcctcaaaggtcacggcattacta
tcacttctcatggcgtcaagacaagagaaccccaacacgaagtctgttgtgttctctcag
ttcaagaagatgcttcttctactagaaaccccgctgaaagctgcgggtttcaccgtctta
cgcttggatggggcaatgactgtgaagaaacggactcaagtcattaaagactttggtaaa
ccggagttaaccggacctgtggtgttgcttgccagcctcaaggcttctggtgctggcata
aacctaactgcagcttcgagggtttacctgttcgagccgtggtggaaccctgcggttgaa
gaacaggccatggacaggattcataggattgggcagaaacaggaggttaaaatgattagg
atgattgcgaggaacagtatcgaagagagggtccttgagcttcagcagaagaagaagaat
cttgctaatgaagcttttaaaagaaggcgtgggaaagatcaaagagaggttaacattgaa
gacgtggtcgctctcatgtctctctga

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