Brassica rapa (field mustard): 103846906
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Entry
103846906 CDS
T03449
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103846906
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
103846906
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
DUF4044
Motif
Other DBs
NCBI-GeneID:
103846906
NCBI-ProteinID:
XP_009122162
UniProt:
M4CY26
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Position
A10:complement(18397819..18402128)
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AA seq
883 aa
AA seq
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MAGSATTTEFRWKPPPQPQPPTQQHQNISDSDSDSGSDSDNNHQQNRHNDLSNSIFKAYL
DCHSSSSPSSLDLSKIQSFLASSSSGAVSCLICLERIKRTDPTWSCTSSCFAVFHLFCIQ
NWARQCLDVHAALAVTRPSTETEPVWNCPKCRSSYLKSKIPSRYLCYCGKEEDPPADNPW
ILPHSCGEVCERGLSNNCGHRCLLLCHPGPCASCPKLVKSKCFCGGVEDVRRCGHKLFSC
GEVCDKVLDCEIHSCREICHDGECPPCRERAVYRCCCGKVEEEKDCCERVFRCEGSCESK
LNCGKHVCERGCHGGECGLCPYQGKRSCPCGKKFYQGLSCDVAAPLCGGTCDKVLGCGYH
RCPERCHRGACLETCRIVVTKSCRCGGTKKQVPCRQDVVCERKCQRMRDCGKHPCRRRCC
DGQCPPCSEICGKKLKCRNHKCQSPCHRGECAPCPIMVSISCACGQTHFEVPCGTENNQR
PPRCRKLCNITPLCRHGQIQKPHKCHYGACPPCRLPCDEEYPCGHKCKLRCHGPRPPPNR
EFILKPTKKMLNVHVESTPGSPCPRCPELVWRPCVGHHLAAERMMVCSDKTQFACDNLCG
NPLPCGNHYCSFTCHPLEIKSSSSDKRSESCEKCELRCQKERSPKCQHPCPRRCHPEDCP
PCKTLVKRSCHCGAMVHAFECIEYNTLSEQEQSKARSCRGPCHRKLPNCTHLCPEICHPG
QCPSPEKCGKKVVVRCKCLTLKKEWLCKDVQAAHRATGSDPKDVQKNHFGVGLLPCDSNC
KSKQQMAESVLQQRNVKEIEEKEEPSGKNATKRRKRRERGQDIKETSRLQKLTVAAKKVV
MVVMLIAVLVAVSYYGYKGILWLSDWMNEVEEQRQKSRRYPRI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggccggatccgccaccaccaccgaattccggtggaaaccaccgccacaacctcagcct
ccgacacaacaacatcaaaacatctccgattcagattccgattcgggatctgactcagac
aacaaccaccagcagaaccgccacaacgatctatccaactccatcttcaaagcctacctc
gattgccactcatcctcatctccctcctccctcgacctctccaagatccaatctttcctc
gcctcctcctcctccggcgccgtctcgtgcctgatctgcctcgagcggatcaaacgcact
gaccccacctggtcctgcacctcctcctgcttcgccgtcttccacctcttctgcatccaa
aactgggctcgccagtgccttgacgtacacgccgcgttggcagtgacgcgaccttcaaca
gaaactgaaccggtgtggaactgtccgaaatgtagatcgtcgtatcttaaatcaaagatc
ccaagtcgatacctttgttactgcgggaaggaggaggatcctccggccgataacccctgg
atcttgccgcattcttgcggcgaggtttgcgagagggggctgagtaacaactgtggccac
cgctgcttgctattgtgtcatcctggtccttgtgcctcttgtcctaagctcgttaaatcc
aaatgcttctgcggcggcgttgaagacgttcgtagatgtggacacaagctcttctcctgc
ggagaggtttgtgataaggtcttggattgtgagatccatagctgtagagagatttgccac
gacggcgagtgtccgccgtgcagggagcgcgcggtttatagatgctgttgtgggaaggtg
gaggaggagaaggattgctgcgagagggtgtttaggtgtgaaggttcgtgtgagagtaag
cttaactgtgggaaacatgtgtgcgagagagggtgtcatggtggagagtgtgggttgtgt
ccttatcaggggaagaggagttgtccctgtgggaagaagttttatcaggggttgtcttgt
gatgttgcggcgcctttgtgtggtgggacttgtgataaagttcttgggtgtgggtatcat
aggtgtccggagaggtgtcaccgtggtgcgtgtcttgagacttgtaggattgtggtgact
aagtcttgtagatgtggaggaacgaagaaacaggttccttgccgtcaagatgtggtgtgt
gagaggaaatgccagaggatgagagattgtgggaagcatccatgtagacgccgttgttgt
gatggtcaatgtccaccatgctctgagatttgtggaaaaaaactcaaatgcagaaaccat
aagtgccagtctccttgtcaccgaggcgaatgtgctccttgtccaataatggtgtcgata
tcatgtgcttgtggtcagacgcattttgaggtaccttgtggcactgaaaataatcagaga
cctcctagatgccgtaaactatgtaatataaccccattgtgcaggcatggacaaatccaa
aagccacataaatgccactatggtgcttgtcctccatgtcgactcccttgtgatgaagaa
tacccatgtgggcataaatgcaaactaaggtgtcatggtcctagacctccaccaaacaga
gaatttatcttaaaaccaacaaagaagatgttgaatgttcatgttgagtctacacctggt
tctccctgccctcgttgtccagagcttgtctggaggccctgtgtaggccatcacctggct
gcagagagaatgatggtttgctctgacaagactcaatttgcatgcgataatctatgcggg
aacccacttccatgtgggaaccattactgctcgtttacatgtcatcccctggaaataaaa
agttcatcatcggataaaagaagtgagtcctgtgaaaagtgtgaactccgctgtcaaaag
gagagatcacctaaatgccaacatccctgtcctcgacgttgccatccagaagattgtcca
ccttgcaaaactctagtaaagagatcatgtcactgtggcgcaatggtgcatgcattcgag
tgcattgagtacaatacattgtctgagcaggaacaatcaaaggcccgctcatgccgtgga
ccttgtcacagaaaattgccaaactgtactcatctgtgtcctgagatttgtcatcctggg
cagtgtccatctccagagaagtgtgggaaaaaggtggttgttcgttgcaagtgcctaact
ttgaagaaagaatggctatgcaaagatgttcaagcagctcatagagccacaggttctgat
cctaaagatgtacaaaagaatcactttggagtcggcctcctcccatgcgattccaactgt
aagagcaagcaacagatggctgaatcggtgttacaacaacgcaatgtcaaagagattgag
gagaaggaggagcctagtgggaaaaatgcaacaaagagaaggaagaggcgtgaacgtggt
caggacattaaggagacctcaaggctgcagaaacttactgttgccgcaaagaaggtagtg
atggtggtgatgctaattgctgttctagtagctgtttcatactatggttataagggaatc
ttgtggctttcggattggatgaatgaagttgaagaacaaagacaaaagtctagaaggtac
ccgcgtatctaa
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