Brassica rapa (field mustard): 103846967
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Entry
103846967 CDS
T03449
Name
(RefSeq) LEC14B protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103846967
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103846967
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Tricorn_2nd
Beta-prop_WDR41
NBCH_WD40
eIF2A
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_VPS8
WDR54
Motif
Other DBs
NCBI-GeneID:
103846967
NCBI-ProteinID:
XP_009122234
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All DBs
Position
A09:807331..810618
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AA seq
495 aa
AA seq
DB search
MFSGPSDSDTDEMGYAMSRLEIESDLCDAGKGYYGVGSSSSSSHRSSERLGDLDNEISQV
TKLKSCPHERFSRQVPGRHQLPVSTVRMLAGRESNFSGRGGRFSSADRCHILSRYLPVKG
PWLVDQMDSRAYVSQFSTDGSLFIAGFQGSHIRIYNVEKGWKVQKDILAKSLRWTVTDTS
LSPDQRNLVYASMSPIVHIVDVGSGTTESHANVTEIHDGLDFSSEEDGGYSFGIFSVKFS
TDGRELVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGHLILSGGDDNLCKV
WDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSTVPARN
EVHRNYEWDYRWMDYPSEARDLKHPYDQSVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYT
GSNDSSVYIYDLESGDKAAVLKHHSSPVRDCNWHPHYPTLISSSWDGDLVKWEFPGSGEP
PIMSKKRVRRRHFYY
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaggaccaagtgattctgatactgatgaaatgggttatgcaatgagtagactc
gagattgaatccgatctctgcgatgctggaaaaggctattacggtgttggtagtagtagc
agtagtagtcacagatcgagtgagcgtttgggtgatttagacaatgagatcagtcaagtc
actaagttgaagtcttgtcctcatgaacggtttagccgtcaagtccccgggaggcatcag
ttgcctgtttccactgtgaggatgttggctggtcgtgagagtaacttctctggaagagga
ggaaggttttcttcagctgatcgttgccatatcttgagtaggtatttgcctgttaagggt
ccttggcttgtggatcagatggatagccgagcttatgtttctcagttttcaactgatggg
tctctcttcattgctgggtttcagggaagccatattcggatttacaatgtagagaaaggt
tggaaagttcaaaaggatattcttgcaaagagcttgcgttggactgttactgatacttct
ctgtcccctgatcagcgaaacctggtttatgcaagcatgtcacctatcgtacacatagtc
gatgttggatctggtacaacagagtctcacgcaaatgtcacggagatccatgatggatta
gacttctcttctgaggaagatggaggctactcttttgggatattctctgttaaattttca
accgatggacgagaacttgttgctgggagcagtgatgattccatttacgtttatgatctt
gaagcaaaccgagtctcactccgtactgttgcacacacatctgatgtgaacactgtgtgt
ttcgccgatgaaagtggacacctgattttatctggaggtgatgataatctctgcaaggtg
tgggataggcgttgtttcattgggagagataagccagctggtgttctagtgggacacctc
gaaggtgttacatttatcgatagccgcggagatggtcgctatttcatatcgaatggcaaa
gaccaaaccatcaagctatgggatatcagaaaaatgtcctcaaccgtacctgcaaggaat
gaggtgcacagaaactatgaatgggattacagatggatggattacccttcggaggcaaga
gatctaaagcacccttatgatcagtctgtgtccacatataaaggtcactcggtgttgcgt
actctcatccgctgctacttctctccagcacatagtactgggcaaaagtacatctacaca
ggatccaacgacagttctgtctacatatatgacttggaaagtggagataaagcagcggtg
ttaaagcaccatagctcacctgtgagagactgtaactggcatccgcattacccgacgctt
ataagctcgtcgtgggacggggatcttgtgaaatgggagtttcctgggagcggtgagccg
ccgatcatgagcaagaagagggttcgaaggagacatttctactactga
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