Brassica rapa (field mustard): 103847098
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Entry
103847098 CDS
T03449
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 2 isoform X2
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
103847098
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
103847098
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
103847098
NCBI-ProteinID:
XP_009122391
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Position
A01:complement(26794652..26817529)
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AA seq
712 aa
AA seq
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MRELLRAYFSRRTLVSLYNLFFTISHKLLTSFPLSVIMPKPNDAVAESDSESVPLLDLSK
PSSPISFPIKSLQYLKSRSYFDSFHFQFNRSTVPLRRNLPDHRPRVLVCHDMKGGYVDDK
WVQGCENDAGYAIWHWYLMDVFVYFSHSLVTIPPPCWTNTAHRHGVKVLGTFITEWDEGK
ATCKEMLATKESAQMYAERLAELATSLGFDGWLINIENEIDKEQVPILMEFVSHLTKVLH
LSTPGSLVIWYDSVTVRGHLKWQDHLNEKNKPFFDLCDGIFMNYTWKESYPKLSAEVAGD
RKYDVYMGIDVFGRGSFGGGQWTVDTALDLLKRNNVSAAIFAPGWVYETAQPPNFHTAQN
KWWSLVEKSWGVVRTYPQVLPFYSDFNQGFGNHVSLEGRQLSDAPWYNISCQSLQPLLEF
KEDNTDIIQVTIDAGEASYNGGGNIVFKGRLEGDVYFTARLFKPLIHLSSSRITVSYSVK
SDETSKLGLLLGFSSPSHETKSILVAPQEPTPRLDHMFLKCLVTSEQTVSEWTVHEASLV
MDGHTLTEISAFCYKTENSTKTSEYVALLGHISIKEHAQLQQNLVSLPPASSWVIEAHSI
ELVPGDSGSMILKVKLEWRQTQLEDSVLPVYNVYAESVKSTDVLRSRKVLEKPRSERVFL
GVSHVPAYYVSELVVDSDVKGVSFVVQPCGEDGSWSKLDVSPKHLVELEGLS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagcttcttcgcgcctatttctcacgaagaacactcgtgtctctctacaacctc
ttcttcaccatctcccataagctcctcacttcgttccctctctccgtcatcatgcccaaa
ccaaacgacgccgtcgcagaatctgattccgagtccgtcccgctgctggatctatcgaaa
ccgtcgtcaccgatctcattcccgatcaaatctctccaatatttaaaatcacgttcgtac
ttcgactcgttccacttccagttcaatcgctccacagtccctctccggcgaaacttacct
gatcatcgcccgagggttttagtgtgccacgatatgaaaggagggtatgttgatgataag
tgggtacaagggtgtgaaaacgacgccggatacgcgatttggcattggtatttgatggat
gtgtttgtttacttctctcattctctggtgacgattcctcctccttgctggaccaataca
gctcacaggcatggcgttaaggtgttggggactttcattacagaatgggatgaaggtaaa
gctacctgcaaagagatgcttgccactaaggagtctgctcagatgtatgcagagcgtttg
gcagagcttgctacttctctaggtttcgatggatggctgataaatatagagaacgaaata
gataaagaacaggttcctattttgatggagttcgtcagccatctaacaaaagtattgcat
ttatccactcctgggtctctggttatatggtacgatagtgtcactgttcgtggccatctt
aaatggcaagatcatttgaatgaaaagaacaaacctttctttgacttgtgtgatggtatc
ttcatgaactatacatggaaggaaagctacccaaaactatcagctgaagttgcaggggac
agaaaatatgatgtttacatgggaattgatgtctttggtcgcggctcctttggtggtggt
caatggactgttgatactgctcttgatttgctgaagagaaacaatgtatcagctgccatt
ttcgctcctggatgggtatatgagactgcacaacctcctaattttcatacagctcagaat
aaatggtggtcacttgttgagaagtcatggggagtagtccgaacatatccacaagtcttg
cctttttactctgacttcaatcagggctttggtaaccatgtatcactcgagggtcgccag
ttatctgatgctccgtggtacaacatttcttgccaaagtcttcagccactcctcgagttc
aaggaagacaacactgatatcattcaggtcactattgatgctggagaggcatcttataac
ggaggagggaacattgtatttaaaggaagactcgagggagatgtgtacttcacagcaagg
ctctttaaacctctaattcacctctcttcttcccgcattacagtctcctactctgtgaaa
tcagatgagacttctaaacttggtctcctgcttgggttttcatcaccatcgcacgagact
aaatccatactcgtggcgccacaagaaccaaccccaagattagatcacatgttcttgaag
tgcctcgttacatcagagcagactgtatcagagtggacggtgcacgaggcaagccttgtc
atggatggacacacactaactgaaatctctgccttttgctacaaaacagagaactcgacg
aagacatcagagtacgttgcattgctgggtcacatctcaatcaaagaacatgctcagctc
cagcaaaacctcgtttccttacctccagcgtcatcatgggtcatcgaggctcatagcata
gagcttgtaccgggtgattccggttctatgatccttaaggttaagctagaatggagacag
acacagcttgaagactctgttctcccagtgtacaatgtgtatgcagagagtgtgaagtca
actgatgtactaagatcgaggaaggttttggagaaaccaagaagcgagagagtgttccta
ggagtgtctcacgtaccagcctattacgtttcggagctggtggtagattctgacgtgaaa
ggagtcagcttcgtggttcaaccgtgtggtgaagatggttcatggagtaagctggatgtt
tcccctaaacatcttgttgaactagaaggtctctcgtag
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