KEGG   Brassica rapa (field mustard): 103847195
Entry
103847195         CDS       T03449                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2
  KO
K12195  charged multivesicular body protein 6
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03250  Viral life cycle - HIV-1
brp04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103847195
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103847195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103847195
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brp04147]
    103847195
Membrane trafficking [BR:brp04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    103847195
Exosome [BR:brp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103847195
  Exosomal proteins of other body fluids (saliva and urine)
   103847195
SSDB
Motif
Pfam: Snf7 TINF2_N HAUS5 CesT_Tir_1 DUF1269 DUF7750 FUSC
Other DBs
NCBI-GeneID: 103847195
NCBI-ProteinID: XP_009122502
UniProt: M4CYS6
LinkDB
Position
A10:19478921..19480744
AA seq 218 aa
MGNMFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL
ALKKKRTQEDLLKQVDQWVINVEQQLADIELTSKQKAVFESLKQGNSAIKAIQSEVNLDD
VQKLMDDTAEAKAYQDELSAILGEKLSEEDEEEILAEFDNLESQLNVEDMPEVPTTEPVR
EEDEILDLPDVPTKQPIAPNAAEIASTKRKVLEEPLEA
NT seq 657 nt   +upstreamnt  +downstreamnt
atggggaatatgttcgtgaagaaaccaaagatcacggaggtcgatcgagcgatcctctct
ctcaaaacccaaaggcgcaagcttggtcaatatcagcaacagcttgagaaagtgattgaa
gccgaaaagcaagctgcgagggacttaatccgggagaagaggaaagacagggctttgtta
gcattgaagaagaagcggacgcaagaagacttattgaagcaagtggatcagtgggtcatc
aatgtcgaacaacaattggcagatattgagctaacaagcaagcagaaggcagtctttgag
agcctaaagcaaggcaacagtgcgattaaagcgattcagagtgaagtcaaccttgatgat
gttcaaaagctaatggatgacactgccgaggccaaggcttatcaggatgagctgagtgcc
atattaggggagaaactatcagaagaagatgaagaagagatcttagcagaattcgacaac
ctagaaagtcagctcaatgttgaagacatgcctgaagtgcctacaacagagcccgtgcgt
gaagaagacgagatattggatctccctgatgtgccaacaaaacaaccaatcgctcccaat
gctgcggaaatcgcttccacaaagagaaaagtacttgaagaacctttggaagcttga

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