Brassica rapa (field mustard): 103847200
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Entry
103847200 CDS
T03449
Name
(RefSeq) vacuolar protein sorting-associated protein 9A
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
103847200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103847200
Membrane trafficking [BR:
brp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103847200
Protein recycling
Other Rab GTPase associated proteins
103847200
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Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF948
Motif
Other DBs
NCBI-GeneID:
103847200
NCBI-ProteinID:
XP_018511099
UniProt:
M4CYT1
A0ACM8RC07
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All DBs
Position
A10
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AA seq
512 aa
AA seq
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MENIDVFPGLHDFLERMRKPSAGDFVKSIKSFIVSFSNHAPDPEKDSEAVQEFFTKMEAA
FRAHPLWSGSSEEELDSAADGLEKYVMTKLFTRVFASNTEDVISDEKLFQKMSLVQQFIS
PESLDIQPTFQNETSWLLAQKELQKMNMYKAPRDKLMCILSCCKVINNLLLNASIASKEN
APGADEFLPVLIYVTIKANPPQFHSNLLYIQRYRRQSKLVGEASYFFTNLLSAESFISNI
DAKSLSMDEADFENKMESARARLSGLGIQSYQTDHGAAPTAHNPKRETTLLQSQSSDSLS
GTNETLNQRSELPIKKAESISDLENKGAATLLNGSSEASKILKEYPYVFASAGDLRVGDV
EGLLNDYKQLVFKYVCLSKGLGEATTSLASSSSPLQPSTETETEDQTTVSSDVQTKTETD
RSVDDLMRALQGEGDNVHKLSDVKQEDYSEDVVQERGEELDPKVVEETDTEDIDLKKLSA
EIEDDNSSSKRAEDEDADSKHLVAEDQNDQSQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggagaacatagacgtattccccgggctgcacgattttctcgagcggatgcgtaaaccc
tccgccggagatttcgtcaaatccattaaaagtttcattgtctcattctcgaaccatgcg
ccagacccggagaaagacagcgaggctgttcaagagttttttaccaagatggaggctgct
ttcagagctcatccactttggtccggttcttctgaggaggagttagacagtgctgcagat
ggactagagaagtatgtcatgacaaagctatttacgcgggtttttgcatcgaacacagag
gatgtaatctctgatgagaaactctttcagaagatgtcgttagttcagcagtttatttct
cctgaaagcttggatatacaacctactttccaaaacgaaacatcatggctgctagctcaa
aaagagctccagaagatgaatatgtacaaagctcctcgtgataagctgatgtgtatcctt
agctgctgcaaagtgatcaataacttactgctaaatgcttctattgcttctaaggagaat
gcacctggagccgacgagtttcttcctgttctcatttatgttaccataaaggctaaccct
ccacagtttcactcaaacttgttatatatacaaagatatagacgtcaatctaaactggtt
ggggaagcttcctacttcttcacgaacctgctctctgcagagtctttcatctcaaatatt
gatgcaaagtccctttctatggatgaagctgactttgaaaacaaaatggaatctgcacgg
gcacgtctctctggtcttggaatccagtcttatcaaactgatcacggcgctgcacccact
gctcataatcccaagagggaaaccacgcttctgcaatcacagtcgtctgatagtctttct
ggaaccaacgaaacactgaatcagagaagtgaactaccgataaagaaagctgaatccatt
tcggatttggaaaataaaggtgctgccacgcttttgaacggtagcagcgaggcgagcaag
atcttgaaagagtatccttacgtgtttgccagtgctggtgatttgagggtgggagatgtt
gaagggctgctaaatgattataaacagttagttttcaaatatgtctgcctctcaaaaggc
ttgggtgaggcaacaacatctttggcttcttcaagctcacctttgcaaccgtctactgaa
actgaaactgaggatcagacaacagtgtcttcagatgttcaaacgaaaaccgaaactgac
aggagcgttgatgatttgatgcgagctttacaaggcgaaggcgacaatgttcataaactt
tcagatgttaaacaagaagattatagtgaagatgttgtgcaagaaaggggtgaagaactt
gatcccaaagttgtagaagaaacagatactgaagacattgatctgaagaagcttagtgca
gagatagaggatgacaattctagttccaaacgagcagaagatgaagacgctgattccaaa
catctagttgcagaagatcagaatgaccaatcacagtga
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