Brassica rapa (field mustard): 103847243
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Entry
103847243 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103847243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103847243
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103847243
Membrane trafficking [BR:
brp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
103847243
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103847243
Exosomal proteins of colorectal cancer cells
103847243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
103847243
NCBI-ProteinID:
XP_009122551
UniProt:
M4CYW4
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All DBs
Position
A10:19616493..19618681
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AA seq
441 aa
AA seq
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MASESRIGSDGLFNTAEVTTSGRPVLRRNEVECFLLSSVDLDSEDDPPRFASLRSGNLIL
TTHRLIWIPSSQPNASSLPSSLPLSSITHIFSHKKSIKSMFHSPRIRFQVDSVVVVTVVF
RGKGDFDGFLTKLWECWRGRAWEEDEKSESEASSGSGAGTVAQGLYGNDGTVRMVGLAGI
LRKEQEQWESTDKSLQDAFQDLNALMSKAKEMVSLAEKMRQKLLSAPSSQNGGGDDEEMG
SKEEMQQWMLSVGIISPVTKESAGALYHQELSRQLADFVRIPLEQAGGMISLTDMYYHFN
RARGTELISPDDLWQACNLWEKFDVPVMLRKFDSGVKVIQNKSHSDEEVMSRIRMLVTKT
ETLRTGVTASDAALTLKIAPAMAKEHLLSAETKGLLCRDMSPDGLRFYFNLFPEIDPTDL
HLVKDFGTYGEWVKATSLLSV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaaagcagaatcggatccgatggtttgtttaacaccgcggaggtaaccacc
agcggcagaccggtgctccgccgcaacgaagtcgagtgtttcctcctctcctctgtcgac
ctagactccgaagacgatccgccgcgattcgcctccttgcgctccggaaacctaatctta
accactcatcgtctcatatggatcccttcttctcagccaaacgcatcatctcttccttcc
tccctccctctctcctccatcactcacatcttctcccacaagaagtcaatcaagtccatg
tttcactcgcctcggatccggttccaagtggactccgtcgtcgtagtgaccgtcgtcttc
agagggaaaggggatttcgacgggttcttgacgaagctctgggagtgttggagagggaga
gcttgggaggaagatgagaagagcgagagtgaggcttcttcggggtcaggagctggaact
gttgcgcagggtttgtacggcaacgatggaacggtgaggatggtggggttggctgggata
ctgaggaaagagcaggagcagtgggagagtactgataagagcttgcaggatgcttttcag
gatttgaatgctcttatgagtaaggctaaggagatggtgagtttggcggagaagatgcgg
cagaagctattgtctgctcctagtagtcagaacggaggaggtgatgatgaggagatgggg
tctaaagaagagatgcaacaatggatgttgagcgttggtattatctctccagttactaag
gaatctgctggcgccttgtatcatcaagagttgtctcgccagttggcagattttgtgaga
atcccattagaacaagctggaggaatgatcagccttactgatatgtattaccacttcaat
cgtgctaggggaacagagttgatttctccagacgatttgtggcaagcttgtaacctctgg
gagaaatttgatgttccagtaatgctgcggaagtttgatagcggtgtgaaggtcatccag
aacaagtcccatagtgacgaggaggttatgagtagaatcagaatgcttgtgactaaaacc
gaaactctaagaaccggagtcactgctagtgatgcagctttgacactgaaaatcgctcca
gccatggccaaggaacatctactatctgcagagaccaaaggtctgctgtgtagagacatg
agcccagacggacttcgattctacttcaacctgtttccagagattgatccaaccgatctc
catttggtcaaggactttgggacatacggtgaatgggtcaaagccactagcttattgtcc
gtatga
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