Brassica rapa (field mustard): 103847405
Help
Entry
103847405 CDS
T03449
Name
(RefSeq) zinc finger protein JACKDAW isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103847405
Transcription factors [BR:
brp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103847405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
C2HC_ASCIZ
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
103847405
NCBI-ProteinID:
XP_009122729
UniProt:
M4CZA2
LinkDB
All DBs
Position
A10:complement(20313479..20316885)
Genome browser
AA seq
516 aa
AA seq
DB search
MQMIPGDPFSISSSMGGFVHQEQHLHHLQQHIQDINPNSNPNPNAKPNSSSAKKKRNQPG
TPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIK
KKVYICPIKTCVHHDSSRALGDLTGIKKHYSRKHGEKKFKCEKCSKKYAVQSDWKAHAKT
CGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNNSAISTTTMTTNLNFGND
SHVMNNSNLPHGFVHRGVHHPDINAAISQFGLGFGHDLTGMHPQGLSEMVQMTSSGNHHL
FPLSSSSVLPDFSGHHHNQQFQIPTTSTNPNLTLSSSSTSQQTSASLPSLQQQHQTLKDS
SFSPLFSSSSETKQNKPLSPMSATALLQKAAQMGSTRSNSTTAPSIFAGPTMTSSSSAAS
PPPRSSSPMMIQQQLNNNFNTNVPREIHNLAPPSSGVTTSSVDNNHRFQSNRSGITPVQQ
MGLTRDFLGVSNEHHPHQTGHRPFLPQELARFAPSG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgattccaggagatccattttctatttcatcttcgatgggagggtttgtccat
caagaacagcatcttcatcatcttcagcagcatatccaggacattaaccctaattctaac
cctaaccctaatgctaaaccaaactcttcatcagctaagaagaagagaaatcagcctggc
accccagatccagatgcggatgtcatcgctctatcgccaaccaccctcatggcaacaaac
agattcgtgtgcgagatctgcaacaaaggatttcaaagggaccagaacctacaactccat
cgccgtggccacaaccttccatggaagctgaagcaacggtccaacaaagaggtgataaag
aagaaagtatacatatgtcctatcaagacttgtgttcaccatgattcttctagggccctt
ggagacctcactggaatcaagaaacactatagccgcaagcacggcgaaaagaagtttaag
tgcgaaaagtgttctaagaaatatgctgttcaatctgattggaaggcgcacgcgaaaact
tgtggcactcgtgagtataagtgcgactgtggcacgttgttctccaggaaagatagtttc
attacgcatagagcgttctgcgatgcattgacagaagaaggtgcaaggatgagttcactt
agtaataattcagcgatctctacaacaacgatgacgacgaatcttaactttggaaatgat
tcacatgttatgaataattcaaatcttccacatggatttgtccaccgaggagttcatcat
cccgacattaatgctgctatctctcagttcggtttagggtttggacatgacctaactgga
atgcatccgcaaggtttatccgagatggtacaaatgacctcctctgggaaccaccatctc
tttccgttgtcttcatcatcagtcctccctgacttttccggccaccaccacaaccaacaa
ttccaaattcccactacttccacaaaccctaatctcaccttatcatcatcctcaacatca
caacaaacctcagcttcactaccatcactacagcaacaacaccaaaccctgaaagactct
tctttctccccactcttctcatcctcctccgaaaccaaacaaaacaagcctctctctcca
atgtctgccactgctctcttacaaaaagctgcacaaatgggatccactagaagcaactcc
accacggctccgtccatctttgccggccctacaatgacgtcatcctcatccgccgcttct
cctccacctcgatcatcttctccaatgatgatccaacaacagctcaacaacaacttcaac
actaatgtcccaagagagatccataatcttgctcctcctagcagtggtgtaaccacgagt
agtgtagataataaccatcgatttcaatcaaaccggtcaggtataaccccggttcagcag
atgggtctaacccgggattttcttggagtgagcaacgagcaccaccctcaccaaactggt
catcgtccgtttttgcctcaggaactcgcaaggtttgctccatcgggttga
DBGET
integrated database retrieval system
