Brassica rapa (field mustard): 103847420
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Entry
103847420 CDS
T03449
Name
(RefSeq) DNA topoisomerase 6 subunit A
KO
K10878
meiotic recombination protein SPO11
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brp03036
]
103847420
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
103847420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
Motif
Other DBs
NCBI-GeneID:
103847420
NCBI-ProteinID:
XP_009122750
UniProt:
A0A397XU45
A0A8D9MJT5
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Position
A10:complement(20362293..20363998)
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AA seq
429 aa
AA seq
DB search
MADKKKRKRTKEDKDEDLPFKSILESDEAILKLLKSYISSSLTAAAAGSSGASSSSSSKP
LTLADLSLSSSCREVADLSLSSVQTEIETVIVQIARSILAGDGFSFSVPSRAASNQLYVP
ELDRIVLKDKSTLRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDVKLFQD
QTQSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPN
IDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKME
LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQC
RLPMTEQDIKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLP
LKLQQQDWL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagaagaagcgaaagcgaactaaagaggacaaagatgaggatcttcctttc
aaaagcatccttgaatcagacgaagctatcctgaaacttctcaaatcctacatctcctct
tctctaaccgccgccgccgcaggaagtagcggcgcctcctcctcgtcttcatcgaaaccg
ctaactctagctgacctctccctctcatcttcctgccgtgaagttgctgatctctccctc
tcctccgtccagacggaaatagagacggtcatcgttcagatcgcccgttcaatcctcgca
ggcgatggcttctccttcagcgttccctcgcgcgccgcatctaaccagctctatgtccct
gagctagaccgcatagtgcttaaagacaaatctaccctccgtccctttgcatcagtttct
tctgtcaggaagacaactatcaccacgcggatactcgcccttatccaccaactctgcctc
aggaacatccacgtcaccaagcgtgatctcttctacactgacgttaagcttttccaggac
cagacacagagtgatgctgtgttggacgacgtgtcgtgtatgctcggctgcacaaggtca
agcctcaatgtaattgcagcggagaaaggtgtggtggtgggaaggctcatattcagtgac
aacggagacatgatagactgcacaaagatggggatgggtgggaaagccattccaccgaac
atcgatcgagttggagacatgcagagtgatgctatgttcatactcttagttgagaaagat
gcagcttacataaggctagctgaagacagattctacaaccggttcccctgcatcatcgtc
actgcaaaaggccagcccgatgtagccacgaggctgttcttgaggaagatgaaaatggag
cttaagcttccggtgcttgccttggtggatagtgatccttacgggttgaagatcttgtcg
gtttatggatgcgggtcgaagaacatgtcttacgatagcgcaaacttgactacacctgat
attaagtggcttgggatcaggccaagtgatttggataagtacaagattcctgagcagtgt
aggttgccgatgactgagcaggatattaagaccgggaaggatatgctggaggaggatttc
gtgaagaagaatcctgggtgggtcgaagaacttaacctgatggtgaagacaaagcagaag
gctgagattcaggcgttgagttcttttggtttccagtatttatcagaagtttacttgccc
ctgaaactgcagcagcaggattggctctga
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