Brassica rapa (field mustard): 103847442
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Entry
103847442 CDS
T03449
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103847442
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
103847442
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Paf1
Tudor_5
Motif
Other DBs
NCBI-GeneID:
103847442
NCBI-ProteinID:
XP_009122771
UniProt:
M4CZD5
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Position
A10:20430386..20433434
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AA seq
576 aa
AA seq
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MASYRPPPPPSPLPPPPQNPPPPPPLPPSLPPPVPPPPPSHQPYAYPPHTYYQQPSHYPP
PQFNQHQAPPPPPPPPSAPPPTVPEPPRNQSTNDRHKAASKPPRERPPSKQHHRPHHPHS
KNPEEERRQRKKREAEKERQQMKTTSHKSQVPKGHTEERKPTPLLTADRVENRLKKPTTF
ICKLKFRNELPDPTAQLKLMTIKRDKDQYTKYTITSLEKLWKPKIFAEPDLGIPLDLLDL
SVYKPPKVRQPLAPEDEELLRDDDAVTPIKKDGIKRKERPTDKGVSWLVKTQYISSINNE
STRQSLTEKRAKELREMKGGVDILQNLNNRERQIKDIEASFEACKSRPVHATNKKLQPVE
VLPLLPYFDRYEEQFVVANFDSAPTADSEFFGKLDSSIRDEHESRAVLKSYVIAGSDNSN
PEKILAYMVPSLDELSKDMHDENEDISYTWVREYLWDIPPKEPNERDTYLVSFEDGTASY
LPLPTRLNMRKRRAREGRASDEIEHLPVPSRVTVRNRSSVSIIEHKDSMVNTNSRNGASS
SKMRRLEDEEGLGRSWKHGSEQDANQYSDNNDDYSE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtaccggccgccgccacctccgtctcctctcccaccgccgcctcaaaatccc
ccaccccctcctccccttcctccgtcgttaccccctccggttcctcccccaccgccgtcg
catcaaccttacgcttatcctccgcatacttactatcagcagccgtctcactatcctcct
cctcaattcaaccagcatcaagctcctccgccgcctcctcctcccccgtcagcacctcct
cccaccgtacccgagcctcctcggaaccaatcgaccaatgaccgccacaaagcggcctcc
aagccgccgcgggagcgtcctccatcgaagcagcaccacaggcctcaccatccgcatagt
aagaatccggaagaggagaggaggcaaaggaagaagagggaggccgagaaagagaggcag
cagatgaaaacaacgtctcacaagtctcaggttcccaaggggcacacggaggagaggaag
cctacgcctctcctcacagccgatagggtcgagaatcggttaaagaaaccaaccaccttc
atctgcaagctcaagtttcggaatgagcttcctgatcctactgctcagcttaagcttatg
accatcaagcgtgataaagatcaatacacaaagtataccatcacgtctctggagaagtta
tggaaaccaaaaatatttgccgagcctgatcttggaataccattggatcttcttgaccta
agtgtctacaagccacccaaagtgaggcagcctcttgcccctgaagatgaagaactgttg
cgtgatgatgatgctgttactcctatcaaaaaagatggcatcaagagaaaagaacgacct
accgataaaggtgtttcatggctcgtcaaaacacagtacatttcttctattaataatgaa
tccacaagacagtctctaacggagaaaagagcaaaggaactgcgagagatgaaaggaggc
gtcgacatcttgcagaatcttaacaatagagagagacagatcaaggatattgaagcatcc
ttcgaggcctgcaaatcccgaccagttcatgccaccaataaaaaattgcagcctgttgaa
gttttaccactattgccatattttgataggtacgaggagcagtttgtggtagcgaatttt
gatagtgctcctacagctgattctgagttttttggcaagttggactcttcaattcgtgat
gaacatgaatcacgggccgttttaaaaagctatgtaattgctggatcggacaatagcaat
cccgaaaaaatcctggcctacatggttccttccttggacgagttgtctaaggacatgcat
gatgaaaacgaggatatctcttatacttgggtccgcgaatacctctgggatataccacca
aaggaaccaaacgagcgtgacacatacctggtgtcgtttgaggatgggaccgctagctat
ttgcccctaccaacaaggctgaacatgaggaagagaagggcccgggaaggacgagcgtct
gatgagattgaacacttaccagtaccttcaagggtgactgtaaggaacagatcgtctgta
tcaataatcgaacataaagattcaatggttaatacaaattctaggaatggtgcgtcgagc
tccaagatgagaaggttagaggacgaagaaggccttggcagatcttggaaacacgggtcg
gaacaagatgctaatcaatatagtgataataatgatgattattctgagtga
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