Brassica rapa (field mustard): 103847584
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Entry
103847584 CDS
T03449
Name
(RefSeq) alpha-L-arabinofuranosidase 2
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00520
Amino sugar and nucleotide sugar metabolism
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
103847584
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
103847584
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GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
zf-CHCC
DUF3805
Motif
Other DBs
NCBI-GeneID:
103847584
NCBI-ProteinID:
XP_033138059
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Position
A10:complement(19664787..19669984)
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AA seq
659 aa
AA seq
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MMDMECSLKFLTSIFLTLFLLGSYSAYENVRLVDAREDNEKHYVTLQVEASNAIGRPIPE
TLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSSIWPWSIIGDESTISVVTDRSSC
FERNKIALRMEVLCNSSGCPSEGVGVYNPGYWGMNIEEGKKYKVTLYVRSTGDIDVSVSL
TSSNGSLTLASEQIIALASEVSKWTKKEMLLEANGTDDGARLQLTTTKNGSIWFDQVSAM
PVDTYKGHGFRNDLFQMMVDLKPRFIRFPGGCYVEGDSLSNAFHWKETVGAWEERPGHFG
DVWNYWTDDGLGHFEFFHLAEDLGAAPIWVFNSGISHHDQVETARIMPFVQEALDGIEFA
RGDANSTWGSVRAAMGHPKPFGLKYVAVGNEECGKKYYKGNYLEFYNAIKKAYPDIKIIS
NCDGSSQPLDHPADYYDFHVYAPAKDLFSMSHKFNNTSRDGPKAFVSEYAAKSETDANKG
NLLAALGEAGFLLGLEKNSDVVGMVSYAPLFVNTNDRRWLPDAIVFNSSHLYGTPSYWVQ
QFFTESSGATLLSSTMEGNSSYVEASAISFQSNGSDYIQIKAVNFANVTVELKVKMTGLD
SSNTKASAKKKKVLTSASVMDENSFSNPEMIKPQESIGVMPEGNFTFVLPPYSFSSFDI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgatggacatggagtgttctctgaagtttctgacaagtattttcctgacattatttctc
cttggctcttattctgcttacgagaatgttcgtcttgttgatgctcgagaagacaacgaa
aaacattatgtgacactgcaagtagaagcttccaacgccataggacgacccattcctgaa
accctttttgggatcttctttgaggaaatcaatcatgctggagcaggtggactgtgggct
gaacttgttagcaacagaggatttgaagctggtggacaaatcattccttccagtatctgg
ccatggtccattattggagatgaatcaaccatatctgtagttacagaccgctcttcatgt
tttgagcgcaacaaaattgcacttagaatggaagtgctttgtaacagcagtggttgtcca
tcagaaggagtcggggtttataacccgggttactggggcatgaacattgaagaaggaaag
aaatacaaagtgaccctttatgtgcgttccactggggacatcgatgtgtctgtgtctttg
acaagctcgaatggatcactaactcttgcatcagagcagattatagctttggcttctgag
gtttcaaaatggacaaagaaggaaatgcttttggaggcaaatggaacagatgatggcgca
aggcttcaattgacaactaccaaaaatggttcaatctggtttgatcaagtctcagccatg
cctgtggatacttataagggacatggttttaggaatgatcttttccaaatgatggttgat
ctaaaacctcgtttcatccgtttccctggtggttgttatgtggagggtgattcgttaagc
aacgcattccactggaaagaaaccgtgggagcttgggaagagaggcctggccactttggt
gatgtttggaactactggacagatgatggtcttggtcactttgagttctttcatctggct
gaagatctcggtgcagctccaatatgggtgtttaacagtggaatcagtcatcatgatcaa
gttgaaaccgcacgtatcatgccgtttgttcaagaagcgctagatggtattgagtttgct
cgtggtgatgctaattcaacatggggatcagttcgagctgcaatgggacatccaaagcct
tttggccttaaatatgttgctgttgggaatgaagagtgtgggaaaaaatactacaaagga
aactaccttgagttctataatgctatcaagaaagcctatccagacatcaaaatcatctcc
aactgcgatggatcgtctcaaccactcgatcaccccgctgattactatgattttcacgtt
tatgctcctgccaaggatttgttttccatgtcccataagtttaacaatacatcgcgtgat
ggtccaaaggctttcgttagtgaatacgctgcgaagagcgaaacagatgctaataaggga
aaccttctagccgctcttggtgaagcaggtttcctccttggtttggaaaagaacagtgat
gttgtaggaatggtaagctatgcacctctcttcgttaacacaaacgacagaaggtggttg
ccagatgctatagttttcaactcgtctcatttgtatggaacaccaagctattgggtccaa
caattcttcacagagtcaagtggagcaactcttctcagctctactatggagggaaactct
tcttatgttgaagcatctgccatatccttccaaagcaatggctctgattacatacagatt
aaggctgttaactttgcaaacgtgacagtagagctgaaggtaaagatgactggattggac
tcgagcaacacgaaagcttctgcaaaaaagaagaaagtacttacatctgccagtgtgatg
gatgagaactccttctccaacccagagatgattaagccacaagaaagcataggggtgatg
ccggaggggaacttcacgtttgttctccctccctactccttttcgtcattcgatatttag
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