Brassica rapa (field mustard): 103847993
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Entry
103847993 CDS
T03449
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03020
RNA polymerase
brp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103847993
09124 Replication and repair
03420 Nucleotide excision repair
103847993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103847993
03400 DNA repair and recombination proteins [BR:
brp03400
]
103847993
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103847993
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103847993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
103847993
NCBI-ProteinID:
XP_009123235
UniProt:
M4FFG5
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All DBs
Position
A09:5929587..5931006
Genome browser
AA seq
321 aa
AA seq
DB search
MDTGATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNS
SVLNDEFIAHRLGLIPLTSERAMNMRFSRDCDACDGDGQCEFCSVEFHLSAKCVTDQTLD
VTSRDLYSADATVTPVDFGVDSSGVADSGEQRGIIIVKLRRGQELKLRAIARKGIGKDHA
KWSPAATVTFMYEPDIIINEDMMDTLTDEEKIDLIESSPTKVFDFDSVTRQVVVVDPEAY
TYDEEVIKKAEAMGKVGLVEIRPKDDSFIFTVESTGAVKASQLVLNAIVLLKQKLDAVRL
SDDTVEADDQFGELGAHMRGG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggcgccacttaccagagattcccaaaggtgaagatccgcgagctcaaagac
gactacgccaagttcgagctccgcgacaccgacgtatccatggccaacgccctccgccgc
gtcatgatctccgaagtccccaccgtcgcgatcgacctcgtcgagatcgaggtcaactcc
tccgtcctcaacgacgagttcatcgctcatcgcctcggtctcatccctctcaccagcgag
agggctatgaacatgcgcttctctcgagactgcgatgcttgcgacggagatggacagtgc
gagttttgctccgttgagtttcatcttagcgccaaatgtgttacggaccaaaccctggat
gttactagtagggatttgtacagtgctgatgctactgttactcctgttgacttcggcgtc
gattcatctggagttgctgattcaggcgagcaaaggggaattataatagtgaaactgcgg
cgtggacaagaactgaagctaagggcaatagcgaggaaaggaatcgggaaagatcacgcg
aaatggtctcctgcagctacggttacgtttatgtatgagcctgacattattatcaatgaa
gatatgatggacactttgacggacgaggaaaagatcgacttgattgagagcagccctacc
aaagtttttgactttgattctgtcaccagacaggttgtggtggttgatccggaagcatac
acttacgatgaagaagtgatcaagaaagcagaagccatggggaaagtggggctcgttgag
atacgtccgaaagacgacagttttatattcactgttgaatccacaggtgcagtgaaggcc
tcgcagctggtactgaatgctatagttctcctgaagcagaagctcgacgcagtccgtctc
tcagacgatactgttgaagctgatgatcagtttggtgaactcggtgcacatatgcgtgga
gggtga
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