Brassica rapa (field mustard): 103848597
Help
Entry
103848597 CDS
T03449
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 44 isoform X1
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00040
Pentose and glucuronate interconversions
brp01100
Metabolic pathways
Module
brp_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103848597
Enzymes [BR:
brp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
103848597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Motif
Other DBs
NCBI-GeneID:
103848597
NCBI-ProteinID:
XP_009123745
LinkDB
All DBs
Position
A01:complement(2278636..2283487)
Genome browser
AA seq
531 aa
AA seq
DB search
MSWWKGFLIFLMLSLCVSSEESMQMQYDYLKVPASEFVGSIDTIVEVISQVTSILSEFAD
FSGDSRLQDAVSDCLDLLDVSSDELSWSAYASQNPNVGSAGKGNGTGNVGSDTKTWLSAA
LSNQDTCMEGFDGTSGLIKPLVAGSLGQLYSMLRDLLPLVEPDQKPQPITKPRPIGKGPT
APPGRTLRNIDDDEESQFPDWFRPDDRRLLETNGVSYDVIVAQDGTGNFTTIMDAVKEAP
DYSWTRFVIYIKKGLYLENVEIKKKKWNLVMLGDGIDVTIISGNRSYIDGSTTFRSATFA
VNGRGFLARDITFQNTAGPEKHQAVALRSDSDLSVFYRCAMRGYQDTLYTHTMRQFYREC
TITGTVDFIFGDGTVVFQNCQILVKKGLPDQKNTITAQGRKEADQPSGFSIQFSNISADA
DLVPYLNTTHTYLGRPWKQYSRTVFMRNNLSDVVRPEGWLEWNTTFALDTLFYGEFLNYG
PGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIEGNLWLPSTGVTFTAGLGV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggtggaagggtttcttgatcttcttgatgttgagtctgtgtgtgtcatcggaa
gagagcatgcaaatgcaatacgactacttgaaagttccggcaagtgagttcgtgggctcc
attgacaccatcgttgaagtaataagccaagtgacttcaattttgtctgagtttgcggat
tttagtggagatagtcggctgcaagatgcggtatctgattgcctggatctgctcgatgtt
tcttcggacgagctgagttggtctgcttatgcttctcagaatccaaatgtggggtcagca
ggtaagggcaacggaacagggaacgtgggatcagacacaaagacatggttaagcgctgct
ctatccaatcaagacacttgcatggaaggcttcgacggtacatctggtctcatcaaacct
cttgtagctggcagtctcggtcaattatattctatgcttagggatctgttaccacttgtt
gagcccgaccagaaacctcaacccattaccaaacctcgtccaattggtaaaggaccaacg
gctccaccaggccggacacttaggaacattgacgacgatgaggaaagtcaattcccagac
tggttcagaccagacgaccggagactccttgaaaccaacggagtgagttacgacgttatt
gtagcacaagatgggacaggcaacttcacgaccataatggacgccgttaaggaagctcct
gattacagctggacacgtttcgtcatatacattaaaaagggtttatacttggagaacgtt
gagatcaagaagaagaaatggaacctcgtaatgttaggtgatggcattgacgtgacaatt
atttccggtaaccgcagctacattgacggctcgaccacgttccgatccgctacattcgct
gtaaacggaagaggattcttggctagagatataacgtttcagaacacagctggaccagag
aagcatcaagccgtagcccttaggtctgactctgacctatctgtgttctatagatgtgcc
atgagaggttatcaagatacactctacacgcacactatgcgtcagttttaccgcgagtgc
accatcactggaacggtggattttatatttggagatggaacagttgtgtttcaaaattgt
caaattttggttaagaaaggactccctgaccaaaagaataccatcactgcacaaggcagg
aaagaagctgaccaaccctcaggattctcgattcagttcagcaatatctcggcggatgca
gacttagtcccatacctgaacacgacacacacgtatctaggaaggccatggaagcaatat
tcaaggacagttttcatgaggaacaacttgagcgacgttgtgaggcctgaaggatggctc
gagtggaacaccacttttgctttggacacactcttctatggagagttcttgaactacgga
ccaggttcaggactcagcagccgagtcaagtggcctggttaccacgtgtttaacaactct
gaccaggccaacaatttcaccgtttctcagttcattgaaggaaacctttggctgccttct
actggagtaacgtttactgctggcttgggtgtctaa
DBGET
integrated database retrieval system
