Brassica rapa (field mustard): 103848834
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Entry
103848834 CDS
T03449
Name
(RefSeq) 3-ketoacyl-CoA synthase 20
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00062
Fatty acid elongation
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
brp04626
Plant-pathogen interaction
Module
brp_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
103848834
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103848834
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
103848834
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Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Chal_sti_synt_N
Motif
Other DBs
NCBI-GeneID:
103848834
NCBI-ProteinID:
XP_009123908
UniProt:
M4F4J2
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Position
A02:21005646..21008586
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AA seq
526 aa
AA seq
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MTQNQDQPHRPVPVHVTNSDQNPNNLPNFLLSVRLKYVKLGYHYLISNALYILLLPLLAA
TLANLSSFSLNDLTLLYNHLRFHFLSATIATALLISLSTAYFTTRPRRVFLLDFSCYKPD
PSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMEEAR
KEAETVMFGAIDAVLEKTGIKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSYNL
GGMGCSAGLISIDLAKQLLQVQPNSYALVVSTENITQNWYLGNDRSMLLSNCIFRMGGAA
VLLSNRSSDRSRSKYQLIHTVRTHKGADDNAFGCVYQREDSNAEETGKVGVSLSKNLMAI
AGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKVKKIKPYIPDFKLAFEHFCIHAGG
RAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAF
GSGFKCNSAVWKALRTVDPVENSNPWSDEIHEFPVAVPRITPVTSS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaatcaagaccaacctcaccgtcctgtccccgtccacgttacaaactccgac
caaaacccaaacaacctccccaacttcctcttgtccgttcgtctcaaatacgtcaaactt
ggttaccattacctgatctccaacgcgctttacatcctcctcctccctctcctcgccgcc
acactcgcaaacctctcctctttttccctcaacgaccttactcttctctacaaccacctc
cgtttccatttcctctccgccactatcgccaccgcgctcttgatctctctctcaaccgct
tacttcaccacccgtcctcgccgtgtcttcctcctcgacttctcatgttacaaaccagac
ccttctttgatctgcactcgagaaacattcatggaccgttctcaacgtgtaggtatcttc
actgaagataatctcgcatttcaacagaagatcctcgagaggtccggtcttggtcagaag
acttacttccctgaagctcttcttcgtgttcctccgaacccttgtatggaggaagcgagg
aaagaagcagagacggttatgttcggggctattgacgcagttcttgagaaaaccggtatt
aaaccgaaagatattggtattcttgtggttaactgtagcttgtttaatccaacgccgtca
ctttctgcgatgattgtgaataagtataagcttagagggaatattctgagttataatctc
ggtggaatgggttgtagtgctggccttatctccattgatctcgctaaacagcttctccag
gtccagccaaactcatacgcactagtggtgagcacagagaacataactcaaaattggtac
ttaggcaatgaccgatcaatgcttctctctaactgcatcttccgtatgggtggagccgcc
gtacttctctcgaaccgctcttccgatcgcagccgttcaaaatatcagctcatccacact
gtccgtacccacaaaggagctgatgacaacgcatttggctgcgtttaccaacgagaagac
agcaacgcagaagaaaccggcaaagtcggagtctctctatcgaaaaacctaatggcaata
gctggagaagctctcaaaacaaacatcacaactctcggaccactcgtcctgccaatgtcc
gagcaacttctctttttcgcaaccctcgtggcacgcaaagtattcaaagtcaagaagatc
aaaccttacattcctgatttcaagctagcgttcgagcatttctgcattcatgctggaggt
agagccgttcttgatgagatagaaaagaatcttgatttgtccgaatggcatatggagcca
tcgaggatgacgttgaaccggtttggtaatacctcaagtagctcgctttggtatgagctt
gcgtatagtgaagctaaaggaaggatcaagagaggagacaggacttggcaaattgctttt
ggatcgggtttcaagtgtaatagtgcggtttggaaagctttgagaacggttgatccggtt
gaaaattctaatccatggagtgatgagattcatgagtttcctgttgcagttcctaggatc
actcccgttacgtcgtcctag
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