Brassica rapa (field mustard): 103849301
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Entry
103849301 CDS
T03449
Name
(RefSeq) myosin-15 isoform X1
KO
K10357
myosin V
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
103849301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103849301
04131 Membrane trafficking [BR:
brp04131
]
103849301
03029 Mitochondrial biogenesis [BR:
brp03029
]
103849301
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
brp04812
]
103849301
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
103849301
mRNA cycle factors
P-body specific factors
103849301
Membrane trafficking [BR:
brp04131
]
Others
Actin-binding proteins
Myosins
103849301
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
103849301
Cytoskeleton proteins [BR:
brp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
103849301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
TSC22
AAA_22
Zeta_toxin
SH3_19
Flp1_like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
103849301
NCBI-ProteinID:
XP_009124357
LinkDB
All DBs
Position
A01:2289528..2302623
Genome browser
AA seq
1514 aa
AA seq
DB search
MDTNLRKGDKVWVEDKDLAWIPGEVLDSSGSKVHVETSTGKKVSVAPEKLFRRDPDDEEH
NGVDDMTKLTYLHEPGVLSNLQRRYALNDIYTYTGSILIAVNPFKKLPHLYDAYMMEQYK
GAPFGELSPHVFAVSEVAYRAMIDDSRSQSILVSGESGAGKTETTKLIMQYLTFVGGRAA
VDDRSVEQQVLESNPLLEAFGNAKTVRNDNSSRFGKFVEIQFDANGRISGAAIRTYLLER
SRVVRITDPERNYHCFYQLCASGNDADKYKLSNPRQFHYLNQSKTYELEGVSNAEEYKNT
RRAMDIVGISHDEQEGIFRTLAAILHLGNVEFSPGKEHDSSVVKDQESRIHLEMAADLFK
CDPNLLLASLCTRSILTREGPIIKALDCNAAVTSRDALSKTVYARLFDWLVDKINRSVGQ
DPNSRFKIGVLDIYGFECFKSNSFEQFCINFANEKLQQHFNEHVFKMEQDEYRKEEINWS
YIEFVDNQDVLDLIEKKPIGVIALLDEACMFPRSTHESFSMKLFHNCKTHPRLEKPKFSE
TDFTLSHYAGKVTYQTETFLDKNRDYAIVEHCNLLSSSKCPFVAGLFPSAPEESTRSSYK
FSSVSSRFKQQLQALMETLNETDPHYVRCVKPNSLNRPQKFENPSVLHQLRCGGVLEAVR
ISLAGYPTRRYYSDFLDRFGLLAPEFIHESSDEQALTEKILRKLGLGNYQLGKTKVFLRA
GQIGILDSRRAEVLDASARLIQRRLRTFVTHQNFISARASAISIQAYCRGCLSRNAYATR
RNAAAAVLVQKHARRWLSRCAFVKFVSAALVIQSYIRADSARLKFAHQKQQRAASVIQAR
WRMHKFRSAFRHRQSSIIAIQCCWRRKLAKREFRKLKQAANEAGALRLAKTKLEKRLEDL
EWRLQLEKRLRTSGEEAKSGEVSKLQKTLESFSLKLDAAKLATINECNKNAVLQKQLDIS
IKEKAAVVKELNGMVELEKENTSLKNSMSSLEKKNLALEKELLSAKTDFNNKLQKLKEAE
KRCSELQTSVQSLEEKLSRLENENHVLRQNTLSLSPKRIGQRVDEKHFSAIVPAQNDRRS
VFATPTPSKHIMPISHSLSEPRRSKFTAERNLENYELLSRCIKENLEFNDDKPLAACVIY
KCLLHWHAFESESTAIFNIIIEGINEALKGGDENSVLPYWLSNSSALLCLLQRNLRSNSF
LNASAQRSGRAAYGVKTPFKLHGPDDGAGQIEARYPAILFKQQLTACVEKIYGLIRDNLK
KELSPLLGLCIQAPKASRGTAGKPSRSPGVAPQQSPSTQWENILKFLDSLMSRLRQNQVP
SFFIRKLVTQVFSFINLSLFNSLLLRRECCTFSNGEYVKSGIAELEKWIASVKEEFAGTS
WHELNYIRQAVGFLVIHQKRKKSLDEIRQDLCPALTIRQIYRISTMYWDDKYGTQSVSSE
VVSQMRVLVDKDSQKLTSNSFLLDDDMSIPFSAEDIDKAIPVLDPSEIEPPKFVSEYTCA
QSLVKDASAATASQ
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaatctgcggaagggcgataaggtttgggttgaggataaagatttggcttgg
attcccggcgaggtgctcgattcttccggtagcaaggttcatgtcgagacttctacgggg
aagaaggtttccgtcgctccggagaagctctttcggagggatcctgacgatgaggagcat
aatggagtggatgatatgaccaagctgacttacttgcacgagcctggtgtgctttccaat
cttcagaggagatacgctttgaatgatatctacacatacactggaagcattttgatcgct
gttaatccatttaagaagcttccacatctctacgatgcgtacatgatggaacagtacaag
ggagcaccattcggtgagctgagtcctcatgtttttgcagtttctgaagttgcttacaga
gcaatgattgacgacagtcgaagtcagtctatcctcgtcagcggtgaaagtggagctggc
aaaactgagacaacgaaactaatcatgcagtatcttacatttgttgggggacgtgcagct
gtagatgatagaagtgttgagcagcaagtccttgaatcaaatccactcttggaagcattt
ggcaacgcgaaaacagttagaaacgataattccagccgttttggcaagtttgtcgaaatc
caatttgacgcaaatggtcgaatatctggtgctgcaatcagaacctaccttctggagaga
tcacgtgtagtccggataacagaccctgagaggaactatcattgtttttatcagctgtgc
gcttccgggaatgacgctgataaatataaactaagcaacccacgtcaatttcattatcta
aatcaaagcaagacatatgaactggagggagtaagcaacgcagaagagtataagaataca
aggagggccatggatattgtgggcataagtcacgatgagcaggaagggatattccgcacg
cttgctgcaattctgcatcttggaaatgttgagttttccccaggaaaagaacacgattct
tctgtagtaaaggatcaggaatctagaattcatctggagatggctgctgatcttttcaag
tgtgatccaaatcttttgttggcttcgctctgcacacgttcaattctgacccgtgaaggt
cccataatcaaagcactcgactgtaatgctgctgtaactagccgggatgcactctcgaag
actgtttacgcccgtctgtttgattggttggttgacaagattaataggtctgttggtcaa
gatccaaactcacgttttaaaattggagtcctggacatttatggctttgaatgctttaag
agtaacagttttgaacaattttgcatcaattttgcaaatgaaaagcttcagcaacatttc
aatgagcatgtattcaagatggagcaggatgagtacagaaaagaagagattaattggagt
tatatcgaatttgttgacaaccaggatgtcttggaccttatagagaagaaacctattggg
gtaattgcactcttggatgaagcttgcatgtttcctagatcaactcatgagtcattttca
atgaagctgttccacaactgtaaaactcatcctagattggagaagccaaaattttcagag
acggactttactctctctcattatgctggcaaggttacttaccagactgaaacgtttttg
gataaaaaccgtgattatgctatagtggagcattgcaatctgttgtcttcctccaaatgc
ccctttgttgctggactttttccgtcagcgccagaggagtctaccaggtcttcttacaaa
ttttcttctgtgtcttccagatttaagcaacaacttcaagctctcatggaaactctcaac
gaaacggatcctcactatgttcgttgtgtgaagccaaattcactcaacagacctcagaag
tttgagaatcctagtgttttacatcaacttcgttgtgggggtgtactggaagctgttcgg
attagtcttgcagggtatcccacacgacggtattattcagacttcttggatcggtttggt
ctgctagctccagagttcatacatgagagcagtgatgagcaggcactgaccgagaaaatc
ttgaggaaattaggtcttgggaattatcagcttggaaagacaaaagtgttccttagagct
ggtcaaattggcattttggactctaggcgggctgaagttcttgatgcttctgcaagactc
attcagcgaagattgagaacatttgttacgcatcagaacttcatctccgcgcgggcctct
gcaatttctattcaagcatactgtagaggatgcctgtctcgaaatgcttacgcgactaga
aggaatgcagcggcagcagttttggtacaaaagcatgcgcgcaggtggctgtcaagatgt
gcatttgtgaaatttgtatcggcggccttagtaatacagtcttacatccgtgctgactcg
gctcgtttgaagtttgcacatcagaaacaacagagagctgcttctgtcattcaggctcgt
tggagaatgcataagtttcggtcagcattcaggcatcgtcaatcttctattattgccatt
cagtgttgttggcggcggaagcttgcaaagagagagtttagaaaacttaaacaggccgct
aatgaagcaggtgctttgcgattagctaaaactaaacttgagaagcggttagaagatctt
gaatggcggttgcagcttgagaaacgattgcgaacaagtggtgaggaggccaagtcaggt
gaagtatccaagcttcaaaaaacattggaatctttcagcctcaagctagatgcagctaag
ctggctaccattaatgaatgcaataagaatgcagtacttcaaaagcaactagacatatcc
ataaaggagaaggctgctgttgtaaaagaacttaatggaatggttgaactggaaaaagag
aacacttcgctgaagaattcgatgagttccttggaaaagaagaatctggctctggagaag
gagcttctgagtgctaaaaccgatttcaataacaaactacagaagttgaaagaagctgaa
aaaagatgttctgaactccagacaagtgttcaaagtctcgaggagaaactctctcgcttg
gagaacgagaaccatgtcttgaggcagaacacgttaagtttatccccaaagagaatagga
caaagagttgatgagaaacactttagtgctattgtaccagctcagaatgacaggagatcc
gtttttgccacacccacaccatcgaagcacattatgccaatctcacatagcctgtcggag
ccacgtcgatccaaattcactgctgaaagaaacttggagaactacgaattgctctccaga
tgtataaaggaaaatttggaattcaatgatgataagccactggctgcttgtgtaatatac
aaatgtcttctgcactggcacgcctttgaatctgagagcacagccatatttaacatcatt
atcgagggaattaatgaagccctcaagggtggagatgagaacagtgtattaccatattgg
ctttcaaactcttcagcacttctatgtctcttgcagagaaatctgcggtcgaatagtttt
ctaaatgctagtgctcagcggtctgggagggctgcatatggagtaaagactccttttaaa
ctccatggacctgacgacggtgctgggcaaatagaagcaagatatcctgcaatattattt
aagcagcagctgacagcatgtgtggaaaagatttatggtctaattcgtgataatttgaag
aaagaattatcaccgcttcttggattgtgcattcaggcgcccaaagcttcacgagggact
gctggaaagccatctagatcaccaggtgttgcgccgcagcaatcaccgagtactcaatgg
gaaaacatacttaaattcttggattctcttatgtcccgcctacgccaaaatcaagtaccc
tcgttcttcattcgcaaacttgtgactcaggttttctcatttatcaacttatcacttttc
aacagtcttctccttcgacgtgaatgttgcacattttcaaatggggaatatgtgaaatct
gggattgcggaattggagaagtggatagccagtgtcaaggaagagtttgcaggaacttct
tggcacgagttaaattacattagacaagctgttggattcttggttatacaccagaagcga
aaaaaatcactggacgaaatcaggcaggacctatgcccggcattgacaataaggcaaata
tatcgaataagtacgatgtactgggatgataaatatggaactcagagtgtctcaagtgag
gtggtttctcaaatgagggtacttgttgacaaggatagccaaaaactaacatccaattcc
ttcttgctggatgatgatatgagcattcctttctctgcagaagatatagataaggctatt
ccagttttagacccatcagaaatagaaccaccgaagtttgtatcagaatatacttgtgca
cagtcccttgtgaaggacgcctctgcagctacagcctcacagtag
DBGET
integrated database retrieval system
