Brassica rapa (field mustard): 103849909
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Entry
103849909 CDS
T03449
Name
(RefSeq) phospholipase D zeta 2
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00564
Glycerophospholipid metabolism
brp00565
Ether lipid metabolism
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
brp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
103849909
00565 Ether lipid metabolism
103849909
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103849909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103849909
Enzymes [BR:
brp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
103849909
Membrane trafficking [BR:
brp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
103849909
Endosome - Golgi transport
Others
Others
103849909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
Motif
Other DBs
NCBI-GeneID:
103849909
NCBI-ProteinID:
XP_009124868
UniProt:
M4FHF3
LinkDB
All DBs
Position
A01:28340620..28346458
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AA seq
1047 aa
AA seq
DB search
MSTEKLLATNGVKSDGVIRRTAATANCLTGGSQIFEELPKAKIVSVSRPDTTDFSPLLLS
YTLELQYKQFKWTLQKKASQVLYLHFALKKRLIIEELHDKQEHVREWLHSLGIFDMQGSV
VQDDEEPDDGALPLHYTEDSVKNRNVPSRAALSIIRPTIGRSETVVDRGRAAMKGYLNLF
LGNLDIVNSKEVCKFLEVSRLSFAREYGSKMKEGYVTVKHLREVPGSDGGRCCLPSQCLG
CFGNSWAKVWAVLKPGFLALLEDPFSGKLLDIMVFDSLGFQGTKESPEQPRLAEQVKERN
PLRFGFKVTSGDRTVRLRTTSCRKVKEWVKAVDEAGSYNPHRFGSFAPPRGLTSDGSQAQ
WFVDGHTAFEAIAFAIQNATSEIFITGWWLCPELYLKRPFQDHPSLRLDALLETKAKQGV
KIYILMYKEVQIALKINSMYSKKRLQNIHKNVKVLRYPDHLSTGIYLWSHHDKIVIVDYQ
VCFIGGLDLCFGRYDTAEHKVGDCPPHIWPGKDYYNPRESEPNSWEETMKDELDRRKYPR
MPWHEVHCALWGPPCRDVARHFVQRWNHSKRNKAPNEQTIPLLMPHHHMVLPHYLGTREI
DIISTAKPEEDPNKPVVLSRQDSFSSASPPQDIPLLLPQETDADFATIGDIKFERGSRQA
LDGRDEYPGETSEESDRDETVNEWWWQIGKQSDCKCQIIRSVSQWSAGTNQPEDSIHQAY
CSLIENAEHFIYIENQFFISGLEKDDTILNRVSEALYRRILKAHEENKCFRVVIVIPLLP
GFQGGIDEFGAATVRALMHWQYRSISRDRTSILYNLKALLGPKTQDYISFYGLRSYGRLF
EDGPIATSQIYVHSKLLIVDDRIAVIGSSNINDRSLLGSRDSEIGVVIEDKEFVESSMNG
VKWMAGKFSYSLRCSLWSEHLGLQPGKVKMIEDPIKDATYQDLWMATAKRNTDIYDKVFS
CIPNENIRSKAALRHNVALCKDKLGHTTIDLGIAPEKLKPCDSDSWEMLKETRGHLVCFP
LHFMCNEEDLRPGFVETEFYTAPQVFH
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggagaaacttctcgccactaacggcgttaaatccgacggcgtcatcagaaga
acggcggcgacggcgaattgtcttaccggcggaagtcagatattcgaagagcttccgaag
gctaagatcgtctctgtctcgagaccagacacgactgattttagccctttgcttctttct
tacaccttggagcttcagtataaacagttcaagtggacattacaaaagaaagcttctcaa
gttctgtacctacactttgctttgaagaaacgtttgatcattgaagaactccacgacaag
caagaacatgttagagaatggttgcatagcttggggatctttgatatgcaaggatcagtt
gtacaagatgacgaagaaccagacgatggtgctcttcctctgcactacactgaagatagt
gtcaagaacaggaatgttccttcccgtgcagcgttatcaatcatccgtccaacgataggc
cgatcagagacagttgtagaccgtgggagagccgcaatgaagggctacttgaatctgttt
ctagggaacttggacattgttaactccaaagaggtctgcaagttcctggaagtatctaga
ctctcgtttgctagagagtacggttcaaagatgaaagaagggtatgtcacagtgaaacac
ctgagggaagtccccgggtctgatggtggccgatgctgtcttccttctcagtgtctaggc
tgctttggtaatagttgggcaaaggtttgggcggttctaaaacctggcttcttggcatta
cttgaagatccgttcagtggaaaacttctagatataatggtgttcgactcattaggtttc
caaggtacaaaagagtcacccgagcaaccgcgtttggctgaacaggtgaaggaacgcaac
ccgttgcgttttggctttaaggttacaagtggtgacagaaccgtgaggctgagaactaca
agctgcaggaaagtcaaagagtgggttaaggccgtggacgaggctggttcctacaatcca
cataggtttggttcgtttgcgccgcctagagggttgacatcagatggaagccaagctcag
tggttcgtggatggccacactgcgtttgaagcgattgcttttgcaatccaaaacgctaca
tcagagatatttatcacgggttggtggttatgcccggagctatatctcaaacgcccgttt
caagatcatccgtctttgcggctagatgccttgctggagacgaaagcaaaacagggcgtt
aagatttatattcttatgtataaagaagttcaaatcgcgctgaaaatcaatagcatgtac
agcaagaaaaggcttcaaaacattcacaagaacgtcaaagttcttcgttatccagaccat
ctgtccactggaatttacctctggtcccaccatgacaagatagtgattgtagattaccaa
gtctgcttcattggagggttagatctctgtttcggccggtacgatacagctgaacacaaa
gttggagattgccctcctcatatatggccaggaaaagattattataaccctagagagtct
gaaccaaactcatgggaagaaacgatgaaagacgagctagaccgtagaaaataccctaga
atgccgtggcatgaggttcactgtgctctctggggaccgccttgtcgcgatgtggctaga
catttcgtccagaggtggaaccactctaagagaaacaaggcacctaatgaacagacgatt
ccattgctgatgcctcatcaccacatggttcttcctcactacttgggaactagagagatc
gatattatctcaacagctaaaccagaggaagaccctaacaaacctgttgttctatccaga
caagactcattctcatctgcctcacctcctcaagacattcctttgcttctcccacaagaa
accgatgcggatttcgccactataggagatattaagtttgaaagaggttcaagacaagcc
ctcgatggtcgagatgaatatcctggagaaacttcagaggaaagcgatagggatgagact
gtgaacgagtggtggtggcagatagggaagcaaagtgattgcaagtgtcagatcatcaga
agtgttagccaatggtcagctggtactaaccaacctgaagatagcattcatcaagcatac
tgttcactcatcgaaaacgctgaacattttatctacatagagaaccaattcttcatctct
gggctagagaaagatgacacgatcctgaaccgcgtttctgaagccttatacagacgcatt
ctgaaggctcatgaggagaacaagtgcttccgtgtcgtgatcgttataccgctcctccct
ggatttcagggaggcattgatgagtttggagcagctacggttcgagcactgatgcattgg
caataccgttcgatctccagagacagaacttcgattctatacaaccttaaagctttgctt
ggtcccaagacgcaagactacatctccttctatggtctgaggtcgtacggacggttgttc
gaggacggtcctattgccactagccagatttacgtgcatagcaagctactgattgttgat
gaccggattgctgtgattggttcttctaatattaacgataggagcttactagggtcacga
gattctgagataggagttgtgattgaagacaaagagttcgttgaatcttcgatgaatgga
gtgaagtggatggcggggaagttctcgtatagtctcagatgttcactttggtcggagcat
cttggtcttcaacccggaaaggtgaaaatgattgaagatccaataaaagatgcaacatac
caagacttgtggatggccacggctaagaggaacactgacatctacgacaaagtcttctct
tgcatacctaatgaaaatatacgttcaaaagctgcattgagacacaatgtggctctttgt
aaagacaagttaggtcatacgacgatcgaccttggcattgcacctgaaaagctaaaaccg
tgcgacagcgactcgtgggagatgctgaaggaaacaagagggcacctcgtatgtttccca
ttacatttcatgtgtaatgaagaagatctcaggccgggtttcgtagaaactgagttctac
actgctcctcaagtcttccactaa
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integrated database retrieval system
