Brassica rapa (field mustard): 103850024
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Entry
103850024 CDS
T03449
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic-like isoform X2
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103850024
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
brp01007
]
103850024
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103850024
Enzymes [BR:
brp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
103850024
Amino acid related enzymes [BR:
brp01007
]
Aminoacyl-tRNA synthetase
Class I (G)
103850024
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103850024
Prokaryotic type
103850024
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
103850024
NCBI-ProteinID:
XP_009124975
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All DBs
Position
A01:28560666..28563235
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AA seq
441 aa
AA seq
DB search
METIEKMIEDFKKVLDDSNHTSPETLKHEMIQWLDETLSPRLKQVLEERETQSSSSSSSE
QTVTPFVVSGKIDYEKVILKFGCTKIDESLIDRVERLTSRGAHVFLRRGFFYAHRDLDKI
LDCHERGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQEAFKVPLVIQITDDEKKIWKKL
NKEKSKRLGRENVKDIIACGFDASNTFIFSSYATVGGKFYENVVEIADCVTVNKANSTFG
FTGEASTAKMIFPSVQAAPSFSSSFPHKLFPDEKKNIPCLIPCAIDQDPYFRLTRDVAPR
LDFIKPALIESKFFPALRGNNGKMSASDANSAIYINDSAKDIKRKINSAVTGGRDNLEDQ
KKYGAKLEEDIPFQYLSFFLEDDAELEHIKKEYGEGRMTTGDVKKRLVQVVTEIVERHRM
ARAAVTDEMVDAFMTPRPLFE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggagacgatagagaagatgatagaggacttcaaaaaagtgctggacgactcaaaccac
acatcacccgagactctgaaacacgagatgatccagtggttggatgagacgctgtcgccg
agactgaaacaagtcctcgaggagagagagactcaatcatcatcatcatcatcatcggag
caaactgtgactccgtttgttgtctccggtaaaatcgattacgagaaggtgatcctcaag
tttggctgcacgaagatagacgagtcgctcattgatcgtgttgagagactcacttcccgt
ggagctcacgttttcctccgccgtggcttcttctacgcccacagggatctcgataagatt
ttggactgtcatgagagaggagacaagttctacctctacactgggagaggaccttcatca
gaatctttgcatctagggcatttgattcctttcttgtttaccaaatacttgcaggaagct
ttcaaggttcctctcgttatacagattacggatgatgaaaaaaaaatatggaagaagtta
aacaaggagaaaagtaaaagacttggcagggaaaatgtgaaagatatcatcgcttgcggt
ttcgatgcctcaaatacctttattttctccagctatgccactgttggcggtaaattctat
gaaaatgtggtggagattgcagattgcgttacagttaacaaggctaattcgactttcggc
tttaccggcgaagcttctactgcaaaaatgatcttcccttctgtgcaggcagctccatct
ttttctagctcattcccacacaagttgttccctgacgagaagaaaaatatcccttgcttg
attccctgtgcaattgaccaggatccgtacttcaggctgactcgtgatgttgcacctcgg
ttagactttataaagcctgctctgattgagtcaaagtttttccctgcgctgcggggaaat
aatgggaaaatgtcagcaagtgatgcaaattccgctatttatattaatgatagcgctaag
gacattaaaagaaagataaacagtgctgttactggtgggcgagataacttggaagatcaa
aaaaaatatggagcaaaactggaggaagacataccatttcagtatttgagtttcttcctg
gaagatgatgctgaacttgaacacataaagaaggagtatggagaaggaagaatgacaaca
ggtgatgtaaagaagagactcgttcaggttgtgacagaaattgtggagagacaccgcatg
gctcgagctgctgttactgatgagatggtggatgcgttcatgactccgagacctctattt
gagtaa
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