Brassica rapa (field mustard): 103850025
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Entry
103850025 CDS
T03449
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103850025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103850025
03036 Chromosome and associated proteins [BR:
brp03036
]
103850025
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
103850025
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
103850025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
103850025
NCBI-ProteinID:
XP_009124976
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All DBs
Position
A01:28563579..28569614
Genome browser
AA seq
1136 aa
AA seq
DB search
MMNEDLARGKDMTGADDETKTLASTVARQILLLVSASSDSTVDADACKEAALTYLESIKT
GNVGVLSQVSFLLVAKDWPLQVRIYASKLLQHLVKLRWDELSSSEQMDISSASFELMSEV
AAANPCEECEMKSETVTLVAEMFEKEEDLEMWQELFLSLASLSSQGPLHAELALKVVKTL
SEHHIDHMKELEDNKYSHHLLQGLPDILVWLHDLLEKHFGDARNAEGRDKVELAKQHSDA
VVACLNAINSLTEWAPVPDFAEYKIIDQCASLLSSPEFCRLACMFFTLICSRERPTDDAS
GAEFDSTIIHICKMMVSLGSTNLHYIFTDSNAIALYLKQMLWFFEHYKFDLHYESLFFWL
GLMDYLTSDLKAPNYPHRKGSASEVFTGSASEVFNSFRHLDGGKKDLLLLIDDETASKML
DVSFQRMNKNDQVLLDPGTNLLSLEPSSFTFEEFCKYQKRLFVLIRLISSHKPIIASTKL
SSRTIMLIKNISVSSAPCVQQYAAAMKSQSTALEGILRRLFRGTDEFAGGSSQVRSQLHV
IFEGLLQELLNANWTEPLLISAHVDYLNAMFPFLKYLPDTVASVIDKMFALLTSLPPASK
RARLYICSSLIRLAKTADKSFTPHLKGLADKMTCLQREGTLFPGEHSSLVEAFFAMTSAS
GGQREQQDSFLLLLEPVRQQWTQPEWQNEYLSTPSGFIQLCSNAPLMRSIVDTVAVFEKA
LKGCNFKKRKLNMSETIHPLASHLSWMLPPLLKLFRVINSLSSPDAYQTLPTKLKEAMKI
TEAELRIPQGKQSRKLTKGFLTYSSKGNTYDIRNWLKAIRESGYRVLNLSVSMGETFYTS
INANEVALTFTENIWWMEFRHIKQLINSFVGCLVSSCPADMWEPLLEPLLSPLLTHCQRA
LDSSWTSLLREGRANVPDLIGFEGGETKLIQLERQLLIDLSRSTSDLLSKISAPELNTGL
PVLKHSDQLVLGEMSLLMDFNALKSNCLVSLLLSCKNLANSVMQFSLQACTWTDGITTFN
LRCLFISVIHLAVMTNNGELREFVAKDLFNAIIMSLTIDENVNNNSILVGMCSDMFVYLS
QRHPAPRQVLLSLPCLTPDDLRDYEKALAETCEPKKQKMITGSMLSLALGISLEIK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacgaggatcttgcgagaggaaaagatatgactggagctgatgatgaaacaaag
actctagctagtactgtggctcgtcagattcttctactcgtctctgcttcttctgactcc
actgttgatgctgatgcttgcaaagaagccgctctaacatatcttgaatcgattaagaca
ggtaatgttggggttctgtctcaagtttcgtttcttcttgtggcaaaggattggccttta
caagttcgcatctacgcctctaagttgctacagcatttggttaaactgcggtgggatgaa
ttgagctcctctgagcagatggatattagtagtgcctcctttgaacttatgtctgaggta
gctgctgctaatccatgtgaagaatgtgagatgaaaagtgaaacagtcactcttgttgct
gagatgtttgaaaaggaggaagatctggagatgtggcaggagttgtttctctcactagct
tccctctcctcccaaggccctttacatgcagaattggctttgaaagtggtgaagacgctt
tctgaacatcatatagatcatatgaaagagttggaagacaataagtatagccatcatctg
ttgcagggacttcctgatattttggtttggttacatgatcttcttgaaaaacactttggg
gatgcaaggaacgcagaagggagggacaaagttgagctggctaagcagcattcagatgca
gttgttgcgtgtttgaatgccatcaactcactcacagaatgggctccagttccggatttt
gctgaatacaaaatcattgaccagtgtgcatctttactttcttctcctgagttctgccgt
cttgcttgtatgttcttcacacttatctgctcaagagaaagacccactgatgatgcttct
ggtgctgagtttgattctacaatcatccatatctgtaaaatgatggtctctctaggctcc
acaaacttacattacatcttcacagatagcaatgccatagctctttatctgaaacagatg
ctctggttttttgaacactataagttcgatcttcactatgagtcactgttcttctggctg
gggttgatggattatttaacctcagacctcaaggctcctaattacccacatagaaaggga
tcggccagcgaggttttcacgggatcagcaagcgaggttttcaatagttttagacaccta
gatggcggaaaaaaggatcttttactccttatagacgatgaaaccgccagcaagatgctg
gatgtttcattccaacgcatgaataagaacgatcaagtcctccttgatcctggaacaaac
ctcctttcccttgagccatcaagttttacatttgaagagttttgcaagtaccagaagagg
ctctttgtgttgatcagactcatctcttctcacaagccaatcattgctagcacaaaacta
tcttcaagaaccatcatgcttattaagaatatatcggtttcttcagcgccttgtgtccag
cagtatgcagctgctatgaagagccagagtactgctctggagggtattctgcgtaggctt
ttccgtggaaccgatgagttcgctggtggtagttcccaagttcgttctcaactccacgtg
atatttgagggcttgcttcaggagctccttaatgcaaactggactgaaccactacttatt
tcagcgcacgttgactatctaaacgcaatgtttcctttcctcaagtacttgccagatacg
gttgcaagtgttatcgacaagatgtttgcacttcttacctctcttccaccagcatctaaa
cgtgcaagattgtacatctgctcatctttgatacgcctagccaaaactgctgacaaaagc
tttactcctcacttgaagggtctagctgataagatgacatgtttgcaaagagaaggaact
ttgttccctggtgagcatagcagtcttgtggaagcattttttgctatgacttctgcgtca
ggaggtcaaagggagcagcaagacagttttcttttgttactagaaccagtgcgccaacaa
tggactcaaccagagtggcaaaacgaatatctatctactccctctggttttattcagtta
tgctccaacgcacccttgatgcggtctattgtcgacacggtcgccgtctttgagaaggct
ctcaagggatgcaacttcaagaaaaggaagctgaacatgtccgagacgattcatcctctg
gcttctcacctttcttggatgctaccacctctcctgaagctctttcgtgttatcaactct
ctgtcttctcctgatgcttatcaaaccttacccacaaaactcaaagaagcaatgaagata
acggaagccgagttacgtatcccccaaggaaagcaaagccgtaaactaactaaaggcttc
cttacttattctagtaaaggaaacacatatgatattcgaaattggctgaaagctattcgt
gaaagcggataccgtgtgctgaatctctctgtaagcatgggagagacgttctacacatcc
atcaatgctaatgaagttgcattgaccttcactgagaatatatggtggatggagttcaga
catataaagcagcttatcaactccttcgtaggatgtcttgtctcatcatgtcctgcagat
atgtgggagccattgcttgaaccgcttctgagtcctttgttgacacactgtcagcgagct
cttgactcctcgtggactagtcttctgcgggaaggcagggccaatgttccggatttgatc
ggttttgaaggtggtgagacgaagctcatacaactggaaagacagctgctcatagattta
tctcggtccacttcggatttgctctcaaagatctctgctcctgagttaaacacagggctt
cctgttctgaagcactcagaccaacttgttcttggtgaaatgtctcttctcatggatttc
aatgcactcaaatccaactgtttggtgagcttactcttgagttgcaaaaacttggcaaac
tcagtaatgcagttttcattacaagcatgcacatggacagatggcattacaaccttcaac
ctccgttgtttattcattagcgttattcatctagccgtaatgacaaacaacggagagctc
agagaatttgtggcaaaagatttgtttaatgcgatcatcatgagcttgaccatcgatgaa
aatgtgaataacaattccattttagtgggtatgtgcagtgacatgttcgtttacctttcc
cagaggcacccagctccacgacaggtgttgctgtcactcccctgtctcactcccgatgat
ctgcgtgattacgaaaaggctttggcagaaacttgtgaacccaaaaaacagaagatgatt
acaggaagcatgttgtcattagctcttggaattagcttagaaataaaataa
DBGET
integrated database retrieval system
